Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1426.8 722 100.0
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1311.2 725 91.3
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1274.2 725 89.1
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1273.8 725 88.8
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1270.4 725 89.1
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1262.3 722 88.0
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1259.6 725 87.9
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1259.2 723 87.7
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1248.8 723 87.7
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1246.1 727 87.5
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1242.3 723 87.0
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1236.1 723 87.0
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1228.8 723 86.7
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1226.5 726 86.4
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1226.5 726 86.4
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1205.3 732 84.8
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1193.3 726 84.8
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1171.8 746 81.1
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1133.2 720 81.7
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 0.0e+00 1109.7 728 76.6
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 2.5e-274 948.7 749 64.9
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.3e-274 948.0 544 87.3
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.6e-273 946.0 746 65.4
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 2.1e-273 945.7 747 64.5
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 2.1e-273 945.7 746 65.3
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 8.1e-273 943.7 743 64.9
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.1e-272 943.3 747 64.9
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 3.5e-268 928.3 748 64.4
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 4.6e-268 927.9 745 64.7
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.3e-267 925.6 744 63.7
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 8.7e-267 923.7 750 63.7
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 2.5e-266 922.2 749 63.6
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 6.2e-265 917.5 744 63.8
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 2.5e-261 905.6 742 63.6
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 2.5e-261 905.6 742 62.9
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.2e-260 903.3 759 62.1
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 4.6e-260 901.4 751 62.3
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 3.9e-259 898.3 741 62.6
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 5.1e-259 897.9 739 62.0
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 8.7e-259 897.1 746 62.2
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.3e-257 893.3 740 60.8
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 5.3e-256 887.9 741 62.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 7.6e-255 884.0 660 67.4
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 8.5e-254 880.6 745 62.1
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 1.4e-253 879.8 744 61.8
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 1.4e-253 879.8 742 62.5
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 1.2e-252 876.7 743 61.0
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.6e-252 876.3 747 61.2
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 2.1e-252 875.9 742 62.7
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 2.7e-252 875.5 736 60.5
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 4.6e-252 874.8 739 61.3
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 7.9e-252 874.0 733 61.7
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 1.5e-250 869.8 745 62.1
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 2.5e-250 869.0 767 60.5
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 4.3e-250 868.2 755 60.0
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 5.7e-250 867.8 742 62.0
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 1.4e-248 863.2 750 60.9
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 2.4e-248 862.4 776 58.2
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 1.5e-247 859.8 744 60.9
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 2.6e-247 859.0 747 60.0
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 2.6e-247 859.0 740 61.8
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 2.9e-246 855.5 748 60.6
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 1.9e-245 852.8 745 59.2
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 2.5e-245 852.4 834 57.0
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 1.6e-244 849.7 720 61.2
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 1.6e-244 849.7 752 60.0
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 2.7e-244 849.0 739 59.5
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 1.4e-243 846.7 606 70.5
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 3.9e-243 845.1 744 59.1
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.4e-242 841.6 775 56.6
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.7e-242 841.3 779 57.1
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 9.7e-242 840.5 732 59.4
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 1.3e-241 840.1 670 65.1
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.3e-241 840.1 747 59.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.4e-240 835.9 780 56.5
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 7.7e-239 830.9 732 59.6
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 2.5e-237 825.9 771 58.9
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 4.2e-237 825.1 769 57.3
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 1.8e-235 819.7 801 55.6
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 2.6e-234 815.8 731 58.4
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 7.4e-234 814.3 758 59.0
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.7e-233 813.1 672 63.1
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 9.1e-232 807.4 759 57.2
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.2e-231 807.0 670 62.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 2.2e-230 802.7 662 62.8
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 8.5e-230 800.8 745 57.7
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 3.6e-228 795.4 669 62.2
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 2.8e-225 785.8 812 53.7
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.9e-221 773.1 739 56.2
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 1.4e-216 756.9 693 58.7
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.7e-215 752.7 736 55.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 2.8e-212 742.7 670 57.9
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 3.0e-211 739.2 812 52.3
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 6.3e-209 731.5 661 58.7
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 4.1e-208 728.8 763 53.5
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 9.2e-208 727.6 752 53.7
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 2.7e-207 726.1 743 53.7
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 1.3e-206 723.8 652 57.7
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 1.7e-201 706.8 569 65.6
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.0e-195 685.6 738 52.0
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 8.9e-195 684.5 744 52.6
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.6e-194 682.9 745 51.9
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 3.2e-192 676.0 725 51.4
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.6e-183 647.1 617 56.6
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 9.9e-178 627.9 625 55.0
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.9e-176 623.6 747 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 5.6e-173 612.1 784 47.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 2.7e-167 593.2 928 41.1
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 2.7e-167 593.2 690 48.3
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 5.6e-165 585.5 745 47.7
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 7.6e-162 575.1 627 51.2
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 3.4e-154 549.7 538 54.8
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 3.8e-153 546.2 597 49.9
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 2.5e-152 543.5 627 49.3
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 4.0e-147 526.2 651 49.9
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 6.1e-135 485.7 528 50.9
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.5e-129 465.7 396 60.1
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 8.0e-111 405.6 393 54.2
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 2.3e-89 334.3 336 53.6
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 7.3e-88 329.3 636 33.8
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 3.9e-73 280.4 702 29.8
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 1.5e-72 278.5 542 36.0
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.5e-61 241.9 372 39.2
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 9.0e-54 216.1 231 48.1
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 9.0e-54 216.1 231 48.1
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 7.9e-50 203.0 578 31.5
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 7.3e-48 196.4 161 64.0
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-41 175.6 150 60.7
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.1e-40 172.6 102 87.3
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 2.4e-38 164.9 162 51.2
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 2.9e-36 157.9 183 43.7
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 5.1e-33 147.1 77 88.3
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 3.3e-32 144.4 77 85.7
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 6.3e-31 140.2 77 84.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 1.1e-22 112.8 56 94.6
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 2.1e-18 98.6 167 39.5
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 2.7e-18 98.2 101 47.5
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 3.6e-18 97.8 191 39.8
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 8.2e-15 86.7 66 72.7
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 8.2e-15 86.7 66 72.7
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 1.1e-14 86.3 50 76.0
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.1e-14 86.3 62 62.9
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 5.9e-13 80.5 78 51.3
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 3.9e-09 67.8 74 51.4
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.6e-08 65.1 56 57.1
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 9.7e-08 63.2 68 50.0
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.8e-07 61.6 68 50.0


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