Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR077430 Cardamine hirsuta HOM05D000135 ORTHO05D011359 4.7e-33 144.4 103 100.0
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 9.6e-18 93.6 101 47.5
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 6.2e-17 90.9 102 55.9
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 1.8e-16 89.4 102 44.1
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 1.8e-16 89.4 102 44.1
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 4.0e-16 88.2 101 44.6
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 1.2e-15 86.7 101 44.6
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 2.2e-14 82.4 102 50.0
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 2.2e-14 82.4 102 50.0
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 4.9e-14 81.3 101 53.5
A05p20660 Brassica napus HOM05D000135 ORTHO05D011359 8.4e-14 80.5 102 62.7
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 1.1e-13 80.1 102 51.0
BolC6t35541H Brassica oleracea HOM05D000135 ORTHO05D011359 1.4e-13 79.7 102 49.0
BcaB07g33677 Brassica carinata HOM05D000135 ORTHO05D011359 3.2e-13 78.6 102 48.0
BcaB02g11072 Brassica carinata HOM05D000135 ORTHO05D011359 1.2e-12 76.6 102 49.0
BraA05t20974Z Brassica rapa HOM05D000135 ORTHO05D011359 1.9e-10 69.3 104 47.1
BcaC05g30534 Brassica carinata HOM05D000135 ORTHO05D011359 2.4e-08 62.4 102 35.3
BcaC05g30277 Brassica carinata HOM05D000135 ORTHO05D011359 4.0e-08 61.6 102 35.3
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 9.0e-08 60.5 110 32.7
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 1.2e-07 60.1 110 33.6
Sp3g02410 Schrenkiella parvula HOM05D000227 ORTHO05D011359 1.2e-07 60.1 101 40.6
C06p04190 Brassica napus HOM05D000135 ORTHO05D011359 1.5e-07 59.7 41 68.3
AT3G03400 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 4.5e-07 58.2 110 33.6
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 9.9e-07 57.0 110 31.8
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 9.9e-07 57.0 108 32.4
C05p63420 Brassica napus HOM05D000227 ORTHO05D011359 2.2e-06 55.8 102 41.2
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 2.2e-06 55.8 109 33.9


User provided reference genes

Program Settings