Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR070570 Cardamine hirsuta HOM05D006773 ORTHO05D008775 5.9e-149 530.8 258 100.0
Sp5g32210 Schrenkiella parvula HOM05D006773 ORTHO05D008775 4.7e-130 468.0 267 87.6
AT1G77090 Arabidopsis thaliana HOM05D006773 ORTHO05D008775 4.8e-127 458.0 262 87.8
Thhalv10019004m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 8.3e-127 457.2 268 84.7
AL2G37260 Arabidopsis lyrata HOM05D006773 ORTHO05D008775 1.8e-126 456.1 261 87.0
BraA07t31788Z Brassica rapa HOM05D006773 ORTHO05D008775 4.5e-125 451.4 264 85.6
Carub.0002s2397 Capsella rubella HOM05D006773 ORTHO05D008775 1.5e-123 446.4 266 84.2
Thhalv10000289m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 1.9e-123 446.0 266 85.0
A07p42660 Brassica napus HOM05D006773 ORTHO05D008775 2.3e-121 439.1 265 84.2
BcaC08g47206 Brassica carinata HOM05D006773 ORTHO05D008775 5.2e-121 438.0 265 84.2
C06p51250 Brassica napus HOM05D006773 ORTHO05D008775 5.2e-121 438.0 265 84.2
Aa31LG4G7120 Aethionema arabicum HOM05D006773 ORTHO05D008775 1.3e-119 433.3 262 81.3
THA.LOC104813693 Tarenaya hassleriana HOM05D006773 ORTHO05D008775 1.5e-115 419.9 267 77.9
Ciclev10002228m.g Citrus clementina HOM05D006773 ORTHO05D008775 1.6e-106 389.8 223 83.0
Sabra02G0057000 Salix brachista HOM05D006773 ORTHO05D008775 3.1e-105 385.6 247 76.1
Thecc.08G143200 Theobroma cacao HOM05D006773 ORTHO05D008775 3.1e-105 385.6 225 81.8
Manes.02G174300 Manihot esculenta HOM05D006773 ORTHO05D008775 6.8e-105 384.4 223 81.6
Cfa018374 Carpinus fangiana HOM05D006773 ORTHO05D008775 1.2e-104 383.6 242 77.7
Atru.chr13.1690 Acer truncatum HOM05D006773 ORTHO05D008775 1.5e-104 383.3 243 77.4
Potri.002G072400 Populus trichocarpa HOM05D006773 ORTHO05D008775 2.0e-104 382.9 247 75.7
CANSAT25G3413 Cannabis sativa HOM05D006773 ORTHO05D008775 2.6e-104 382.5 222 82.0
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 2.6e-104 382.5 223 80.7
Dinv25798 Davidia involucrata HOM05D006773 ORTHO05D008775 9.8e-104 380.6 230 78.7
Actinidia16591 Actinidia chinensis HOM05D006773 ORTHO05D008775 4.9e-103 378.3 274 69.3
MSTRG.22383 Avicennia marina HOM05D006773 ORTHO05D008775 8.3e-103 377.5 225 79.6
GSVIVG01010018001 Vitis vinifera HOM05D006773 ORTHO05D008775 8.3e-103 377.5 223 81.6
Nitab4.5_0000445g0090 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.1e-102 377.1 242 73.6
Gohir.A02G067200 Gossypium hirsutum HOM05D006773 ORTHO05D008775 1.9e-102 376.3 225 79.6
Gohir.D02G073400 Gossypium hirsutum HOM05D006773 ORTHO05D008775 2.4e-102 375.9 225 78.7
Phvul.009G134500 Phaseolus vulgaris HOM05D006773 ORTHO05D008775 2.4e-102 375.9 225 79.6
Migut.N03240 Erythranthe guttata HOM05D006773 ORTHO05D008775 4.1e-102 375.2 226 79.6
Duzib093G1219 Durio zibethinus HOM05D006773 ORTHO05D008775 5.4e-102 374.8 241 76.3
Gorai.005G082800 Gossypium raimondii HOM05D006773 ORTHO05D008775 5.4e-102 374.8 225 79.1
RcHm_v2.0_Chr6g0277361 Rosa chinensis HOM05D006773 ORTHO05D008775 7.0e-102 374.4 223 80.3
QL09p028661 Quercus lobata HOM05D006773 ORTHO05D008775 1.2e-101 373.6 222 79.3
Nitab4.5_0004095g0010 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.6e-101 373.2 242 73.1
CAN.G2.47 Capsicum annuum HOM05D006773 ORTHO05D008775 2.0e-101 372.9 242 73.6
vmacro00729 Vaccinium macrocarpon HOM05D006773 ORTHO05D008775 2.0e-101 372.9 242 76.4
MD10G1012400 Malus domestica HOM05D006773 ORTHO05D008775 6.0e-101 371.3 268 70.9
Oeu025718.1 Olea europaea HOM05D006773 ORTHO05D008775 7.8e-101 370.9 246 73.2
VMungo1309G1948 Vigna mungo HOM05D006773 ORTHO05D008775 1.7e-100 369.8 218 81.7
Lalb_Chr08g0240801 Lupinus albus HOM05D006773 ORTHO05D008775 3.0e-100 369.0 218 81.7
Prupe.8G017800 Prunus persica HOM05D006773 ORTHO05D008775 5.0e-100 368.2 218 81.2
CiPaw.15G022300 Carya illinoinensis HOM05D006773 ORTHO05D008775 6.6e-100 367.9 223 78.9
TAR625G1315 Trochodendron aralioides HOM05D006773 ORTHO05D008775 6.6e-100 367.9 248 72.6
ATR1136G180 Amborella trichopoda HOM05D006773 ORTHO05D008775 8.6e-100 367.5 224 79.9
FvH4_2g14791 Fragaria vesca HOM05D006773 ORTHO05D008775 1.1e-99 367.1 223 78.9
FAN15G2829 Fragaria x ananassa HOM05D006773 ORTHO05D008775 1.1e-99 367.1 223 78.9
Medtr3g089890 Medicago truncatula HOM05D006773 ORTHO05D008775 1.1e-99 367.1 226 77.9
Peaxi162Scf00263g00028 Petunia axillaris HOM05D006773 ORTHO05D008775 1.1e-99 367.1 242 72.3
Glyma.06G122400 Glycine max HOM05D006773 ORTHO05D008775 1.5e-99 366.7 227 78.0
COL.COLO4_33185 Corchorus olitorius HOM05D006773 ORTHO05D008775 4.3e-99 365.2 226 80.5
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 7.3e-99 364.4 218 80.3
Solyc04g064670.3 Solanum lycopersicum HOM05D006773 ORTHO05D008775 7.3e-99 364.4 249 71.9
arahy.Tifrunner.gnm1.ann1.85NLUF Arachis hypogaea HOM05D006773 ORTHO05D008775 9.5e-99 364.0 240 72.9
Rhsim09G0002200 Rhododendron simsii HOM05D006773 ORTHO05D008775 9.5e-99 364.0 204 85.3
PGSC0003DMG401024815 Solanum tuberosum HOM05D006773 ORTHO05D008775 1.6e-98 363.2 217 79.3
ClCG09G009710 Citrullus lanatus HOM05D006773 ORTHO05D008775 2.1e-98 362.8 245 73.1
Lj7C363G2 Lonicera japonica HOM05D006773 ORTHO05D008775 2.8e-98 362.5 249 73.1
TWI60G1234 Tripterygium wilfordii HOM05D006773 ORTHO05D008775 1.4e-97 360.1 225 77.3
MD05G1012500 Malus domestica HOM05D006773 ORTHO05D008775 2.3e-97 359.4 219 79.9
MELO3C023682.2 Cucumis melo HOM05D006773 ORTHO05D008775 3.1e-97 359.0 226 77.0
Glyma.04G241000 Glycine max HOM05D006773 ORTHO05D008775 3.1e-97 359.0 215 79.5
Cc10_g12990 Coffea canephora HOM05D006773 ORTHO05D008775 6.8e-97 357.8 215 80.5
Atru.BG.245.p Acer truncatum HOM05D006773 ORTHO05D008775 8.9e-97 357.5 231 75.8
CsaV3_7G025030 Cucumis sativus L. HOM05D006773 ORTHO05D008775 8.9e-97 357.5 226 75.7
SalBow6G0822 Salvia bowleyana HOM05D006773 ORTHO05D008775 1.5e-96 356.7 242 73.6
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 2.6e-96 355.9 235 74.0
Sc20g0003340 Simmondsia chinensis HOM05D006773 ORTHO05D008775 2.6e-96 355.9 250 70.8
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 4.4e-96 355.1 252 69.0
PGR042G0338 Punica granatum HOM05D006773 ORTHO05D008775 5.8e-96 354.8 243 74.1
Eucgr.F02746 Eucalyptus grandis HOM05D006773 ORTHO05D008775 1.3e-95 353.6 218 78.0
EL10Ac1g01469 Beta vulgaris HOM05D006773 ORTHO05D008775 2.2e-95 352.8 236 76.7
AUR62013482 Chenopodium quinoa HOM05D006773 ORTHO05D008775 3.7e-95 352.1 221 78.7
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 6.4e-95 351.3 247 68.8
AUR62026790 Chenopodium quinoa HOM05D006773 ORTHO05D008775 1.4e-94 350.1 246 70.7
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 1.4e-94 350.1 223 77.1
PSO675G5006 Papaver somniferum HOM05D006773 ORTHO05D008775 3.2e-94 349.0 254 67.3
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 4.1e-94 348.6 219 77.2
Ah.16g108660 Amaranthus hybridus HOM05D006773 ORTHO05D008775 9.2e-94 347.4 243 70.8
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 2.1e-93 346.3 228 72.4
Cpa.g.sc49.74 Carica papaya HOM05D006773 ORTHO05D008775 9.5e-91 337.4 216 78.7
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 9.5e-91 337.4 228 74.6
MBI06_g35966_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 1.1e-89 334.0 197 81.2
Psat5g080880 Pisum sativum HOM05D006773 ORTHO05D008775 1.4e-89 333.6 207 78.3
HPP92_004476 Vanilla planifolia HOM05D006773 ORTHO05D008775 2.6e-88 329.3 215 74.0
TPR.G18761 Trifolium pratense HOM05D006773 ORTHO05D008775 4.4e-88 328.6 204 77.9
FvH4_7g25010 Fragaria vesca HOM05D006773 ORTHO05D008775 8.4e-87 324.3 224 71.4
SGA_v2.0_scaffold19G08634 Striga asiatica HOM05D006773 ORTHO05D008775 7.1e-86 321.2 177 84.7
Os12g0190200 Oryza sativa ssp. japonica HOM05D006773 ORTHO05D008775 4.6e-85 318.5 235 66.8
arahy.Tifrunner.gnm1.ann1.61R3GI Arachis hypogaea HOM05D006773 ORTHO05D008775 2.6e-80 302.8 170 81.8
Nn5g28592 Nelumbo nucifera HOM05D006773 ORTHO05D008775 2.6e-80 302.8 170 85.9
Sed0012245 Sechium edule HOM05D006773 ORTHO05D008775 2.6e-80 302.8 174 81.6
Sopen04g026630 Solanum pennellii HOM05D006773 ORTHO05D008775 5.8e-80 301.6 170 81.8
MBI06_g41413_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 1.2e-77 293.9 178 79.8
unitig_52.g17539 Utricularia gibba HOM05D006773 ORTHO05D008775 1.2e-77 293.9 169 81.7
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 3.5e-77 292.4 262 56.5
Mapoly0002s0218 Marchantia polymorpha HOM05D006773 ORTHO05D008775 2.3e-76 289.7 237 59.5
AagrBONN_evm.TU.Sc2ySwM_344.1575 Anthoceros agrestis HOM05D006773 ORTHO05D008775 1.1e-73 280.8 186 72.6
SMO270G0074 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 1.2e-64 250.8 168 68.5
FAN06G4159 Fragaria x ananassa HOM05D006773 ORTHO05D008775 4.9e-63 245.4 177 70.1
HPP92_004480 Vanilla planifolia HOM05D006773 ORTHO05D008775 1.1e-62 244.2 215 57.7
CSS0027898 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 7.9e-53 211.5 120 82.5
Cre03.g198950 Chlamydomonas reinhardtii HOM05D006773 ORTHO05D008775 5.7e-51 205.3 217 47.5
SMO367G0103 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 5.7e-43 178.7 134 62.7
PSO017G5067 Papaver somniferum HOM05D006773 ORTHO05D008775 6.3e-42 175.3 113 73.5
CSS0029334 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 2.0e-40 170.2 98 82.7
MCO01G018 Micromonas commoda HOM05D006773 ORTHO05D008775 7.2e-38 161.8 187 45.5
SEGI_34187 Sequoiadendron giganteum HOM05D006773 ORTHO05D008775 7.2e-38 161.8 111 71.2
PRCOL_00003420 Prasinoderma coloniale HOM05D006773 ORTHO05D008775 6.7e-36 155.2 202 42.6
Hma1.2p1_1563F.1_g290820 Hydrangea macrophylla HOM05D006773 ORTHO05D008775 6.7e-28 128.6 74 83.8
CBR_g39641 Chara braunii HOM05D006773 ORTHO05D008775 5.3e-25 119.0 96 57.3
ATR1136G134 Amborella trichopoda HOM05D006773 ORTHO05D008775 1.2e-21 107.8 60 80.0
AagrBONN_evm.TU.Sc2ySwM_368.1623 Anthoceros agrestis HOM05D006773 ORTHO05D008775 5.2e-20 102.4 213 34.3
Medtr6g018710 Medicago truncatula HOM05D006773 ORTHO05D008775 2.8e-18 96.7 62 72.6
CBR_g17613 Chara braunii HOM05D007080 ORTHO05D008990 1.6e-16 90.9 162 32.7
Pp3c4_10510 Physcomitrium patens HOM05D007080 ORTHO05D008990 2.7e-16 90.1 160 34.4
Migut.K00153 Erythranthe guttata HOM05D007080 ORTHO05D008990 3.8e-15 86.3 160 29.4
SMO347G0313 Selaginella moellendorffii HOM05D007080 ORTHO05D008990 2.5e-14 83.6 159 30.2
Mapoly0008s0145 Marchantia polymorpha HOM05D007080 ORTHO05D008990 3.2e-14 83.2 240 25.0
AagrBONN_evm.TU.Sc2ySwM_228.1885 Anthoceros agrestis HOM05D007080 ORTHO05D008990 4.2e-14 82.8 160 30.6
MCO07G710 Micromonas commoda HOM05D006773 ORTHO05D269516 5.2e-12 75.9 157 33.8
Pp3c2_15810 Physcomitrium patens HOM05D006773 ORTHO05D316139 5.0e-07 59.3 128 35.2
BolC6t40147H Brassica oleracea HOM05D006773 ORTHO05D008775 5.5e-06 55.8 71 52.1


User provided reference genes

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