Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 2.4e-39 165.2 94 100.0
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 6.5e-21 104.0 93 73.1
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 4.3e-17 91.3 73 76.7
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 7.4e-17 90.5 67 76.1
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 9.7e-17 90.1 67 76.1
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 6.9e-15 84.0 72 66.7
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 2.9e-13 78.6 92 57.6
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 3.2e-12 75.1 64 67.2
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 4.2e-12 74.7 64 67.2
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 7.2e-12 73.9 86 55.8
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 9.4e-12 73.6 64 67.2
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 9.4e-12 73.6 64 67.2
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 9.4e-12 73.6 64 67.2
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 9.4e-12 73.6 64 67.2
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 2.1e-11 72.4 102 52.9
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 3.0e-10 68.6 91 51.6
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 8.8e-10 67.0 103 49.5
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 8.8e-10 67.0 76 53.9
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 9.7e-09 63.5 74 48.6
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 1.3e-08 63.2 93 45.2
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 2.2e-08 62.4 76 52.6
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 3.7e-08 61.6 104 44.2
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 4.8e-08 61.2 60 55.0
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 4.8e-08 61.2 70 52.9
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 4.8e-08 61.2 74 52.7
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 6.3e-08 60.8 81 46.9
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 6.3e-08 60.8 64 53.1
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 6.3e-08 60.8 86 44.2
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 6.3e-08 60.8 77 44.2
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 1.1e-07 60.1 86 47.7
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 1.1e-07 60.1 69 50.7
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 1.4e-07 59.7 60 53.3
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 1.8e-07 59.3 81 48.1
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 1.8e-07 59.3 96 46.9
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 2.4e-07 58.9 63 50.8
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 3.1e-07 58.5 76 43.4
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 4.1e-07 58.2 100 44.0
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 5.3e-07 57.8 75 46.7
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 5.3e-07 57.8 65 50.8
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 5.3e-07 57.8 74 47.3
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 6.9e-07 57.4 71 47.9
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 9.1e-07 57.0 62 50.0
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 1.2e-06 56.6 69 46.4
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 2.6e-06 55.5 83 41.0
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 3.4e-06 55.1 93 40.9
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 4.5e-06 54.7 86 37.2
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 4.5e-06 54.7 86 37.2
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 5.9e-06 54.3 86 41.9
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 5.9e-06 54.3 77 40.3
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 5.9e-06 54.3 86 36.0
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 5.9e-06 54.3 62 48.4
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 5.9e-06 54.3 79 46.8


User provided reference genes

Program Settings