Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-58 229.6 106 100.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 4.8e-49 197.6 106 82.1
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 3.1e-48 194.9 104 81.7
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 3.1e-48 194.9 104 81.7
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 5.4e-48 194.1 104 79.8
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.0e-47 192.2 106 80.2
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.9e-45 185.7 102 77.5
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.5e-45 184.1 104 77.9
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.2e-44 183.0 106 76.4
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.2e-44 183.0 106 76.4
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 4.0e-43 177.9 101 76.2
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-42 176.4 111 70.3
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.2e-42 176.4 111 70.3
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 5.7e-42 174.1 101 75.2
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 5.7e-42 174.1 101 75.2
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.7e-41 172.6 102 76.5
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.2e-41 172.2 102 71.6
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.8e-41 171.8 106 69.8
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 2.4e-40 168.7 101 72.3
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-38 162.9 101 71.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.3e-37 158.3 104 64.4
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.3e-37 157.1 104 65.4
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.3e-37 157.1 104 65.4
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.6e-36 156.0 104 64.4
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-36 156.0 104 64.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.1e-36 155.6 104 64.4
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 6.1e-36 154.1 104 62.5
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.3e-35 152.1 104 61.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 3.0e-35 151.8 92 70.7
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 3.0e-35 151.8 104 64.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 4.0e-35 151.4 104 61.5
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.2e-34 149.8 104 59.6
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.2e-34 149.8 104 58.7
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.4e-34 148.3 100 60.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.4e-34 148.3 100 60.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 3.4e-34 148.3 104 56.7
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.5e-34 147.1 104 58.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.5e-34 147.1 104 58.7
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 7.5e-34 147.1 104 58.7
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.3e-33 146.4 106 60.4
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.3e-33 146.4 104 60.6
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.7e-33 146.0 104 59.6
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.4e-33 144.1 100 62.0
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.1e-32 143.3 104 60.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.8e-32 142.5 104 58.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.4e-32 142.1 93 65.6
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.4e-32 142.1 104 57.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 5.4e-32 141.0 104 57.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 5.4e-32 141.0 101 57.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 9.2e-32 140.2 104 59.6
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 9.2e-32 140.2 103 58.3
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 9.2e-32 140.2 104 57.7
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 2.0e-31 139.0 104 57.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 2.0e-31 139.0 100 58.0
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.7e-31 138.7 106 57.5
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.7e-31 138.7 101 57.4
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.5e-31 138.3 104 58.7
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.6e-31 137.9 93 63.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 5.9e-31 137.5 93 61.3
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.3e-30 135.6 100 57.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 3.0e-30 135.2 102 54.9
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 8.6e-30 133.7 90 62.2
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.5e-29 132.9 105 56.2
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.5e-29 132.9 101 56.4
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 4.3e-29 131.3 99 57.6
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 7.3e-29 130.6 101 54.5
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 9.5e-29 130.2 66 77.3
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 3.6e-28 128.3 99 55.6
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.3e-27 125.6 97 54.6
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.1e-27 125.2 82 64.6
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 8.9e-27 123.6 91 59.3
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.6e-26 122.1 96 56.2
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 50.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 7.5e-26 120.6 96 57.3
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 9.8e-26 120.2 93 57.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 9.8e-26 120.2 100 47.0
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-25 119.8 103 52.4
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.7e-25 119.4 92 57.6
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.7e-25 119.4 62 74.2
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.2e-25 119.0 96 54.2
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 8.3e-25 117.1 104 48.1
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.4e-24 116.3 99 54.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 3.2e-24 115.2 98 53.1
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 4.1e-24 114.8 96 52.1
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 9.2e-24 113.6 101 54.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 9.2e-24 113.6 101 54.5
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.7e-23 112.1 96 52.1
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 6.0e-23 110.9 91 54.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 7.8e-23 110.5 79 60.8
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.8e-23 110.5 84 58.3
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 7.8e-23 110.5 96 54.2
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-22 109.8 91 51.6
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.7e-22 109.4 89 57.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.3e-22 109.0 73 63.0
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 8.6e-22 107.1 83 56.6
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 8.6e-22 107.1 112 47.3
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.1e-21 106.7 97 50.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.5e-21 106.3 82 53.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.9e-21 105.9 107 44.9
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.6e-21 104.4 68 64.7
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 5.6e-21 104.4 89 51.7
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.6e-20 101.7 96 43.8
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 8.1e-20 100.5 111 42.3
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 8.9e-19 97.1 49 79.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-18 96.7 103 44.7
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 9.8e-18 93.6 86 47.7
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.2e-17 92.4 48 72.9
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 6.2e-12 74.3 102 36.3
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 4.0e-11 71.6 81 40.7
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 2.9e-09 65.5 96 36.5


User provided reference genes

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