Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.4e-171 606.3 320 100.0
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 1.2e-154 550.1 320 88.8
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.2e-151 540.0 320 87.5
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.6e-151 539.7 317 86.4
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 2.7e-151 538.9 320 85.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.6e-146 522.3 311 85.2
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 2.2e-145 519.2 315 87.3
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 5.4e-144 514.6 321 84.1
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 6.2e-140 501.1 341 78.9
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 4.2e-128 461.8 310 76.1
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 2.2e-121 439.5 307 74.3
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 3.9e-118 428.7 332 71.1
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 5.1e-118 428.3 263 87.5
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 3.4e-114 415.6 270 84.4
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 2.9e-113 412.5 256 82.4
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 5.5e-112 408.3 264 83.3
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 1.2e-111 407.1 302 67.2
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 8.7e-110 401.0 305 67.5
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.5e-109 400.2 318 64.8
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 1.9e-109 399.8 306 65.7
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 7.4e-109 397.9 306 65.0
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 7.4e-109 397.9 307 65.1
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-108 397.1 309 66.0
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-108 397.1 309 66.0
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.3e-108 397.1 302 66.2
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 2.1e-108 396.4 309 64.4
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 2.8e-108 396.0 309 63.8
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 3.7e-108 395.6 304 65.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 3.7e-108 395.6 318 62.3
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 1.1e-107 394.0 299 65.9
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.8e-107 393.3 305 64.9
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 2.4e-107 392.9 317 63.4
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 4.0e-107 392.1 310 65.2
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 4.0e-107 392.1 305 67.9
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.7e-105 386.7 306 64.4
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 1.7e-105 386.7 315 64.4
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.2e-105 386.3 316 63.0
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 3.8e-105 385.6 263 72.6
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 3.8e-105 385.6 268 70.9
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 4.9e-105 385.2 308 62.7
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.5e-104 382.9 307 64.2
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 5.5e-104 381.7 263 73.0
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 7.1e-104 381.3 288 67.0
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.2e-103 380.6 313 60.4
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.2e-103 380.6 267 70.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 2.7e-103 379.4 301 63.1
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 2.7e-103 379.4 309 61.8
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.5e-103 379.0 303 62.7
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 7.9e-103 377.9 307 61.9
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 7.9e-103 377.9 307 61.6
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.3e-102 377.1 303 62.4
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.3e-102 377.1 308 61.7
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.3e-102 377.1 314 62.7
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.8e-102 376.7 301 63.1
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.1e-101 374.0 304 61.8
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.5e-101 373.6 258 72.1
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 5.7e-101 371.7 260 71.2
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 5.7e-101 371.7 301 62.5
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.4e-101 371.3 316 60.8
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 9.6e-101 370.9 316 61.4
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 9.6e-101 370.9 303 63.0
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.3e-100 370.5 304 62.2
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.6e-100 370.2 263 70.7
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.1e-100 369.8 263 70.3
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.1e-100 369.8 297 62.6
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.1e-100 369.8 297 62.6
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 4.8e-100 368.6 303 61.7
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 4.8e-100 368.6 287 66.9
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 6.3e-100 368.2 312 61.5
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 1.1e-99 367.5 306 59.8
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.4e-99 367.1 307 62.5
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.1e-99 365.9 295 62.7
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 4.1e-99 365.5 264 69.3
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 9.0e-99 364.4 306 62.4
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.2e-98 364.0 314 60.2
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.5e-98 363.6 307 60.6
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 2.0e-98 363.2 306 63.4
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 5.9e-98 361.7 315 59.4
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.0e-97 360.9 286 61.5
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.3e-97 360.5 342 56.7
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 2.2e-97 359.8 262 70.2
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 1.1e-96 357.5 337 57.6
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 7.2e-96 354.8 315 58.7
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 7.2e-96 354.8 251 68.1
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 9.3e-96 354.4 254 70.9
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.5e-93 347.1 267 62.9
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.5e-93 347.1 313 60.4
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 2.5e-93 346.3 285 61.1
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 2.2e-92 343.2 307 59.9
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 8.2e-92 341.3 297 58.2
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.1e-91 340.9 313 59.1
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 2.4e-91 339.7 303 59.7
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.7e-89 333.6 277 62.5
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 5.0e-89 332.0 309 57.9
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 2.7e-87 326.2 288 57.6
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 8.8e-86 321.2 262 59.5
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 1.7e-84 317.0 253 64.4
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 2.4e-83 313.2 268 60.4
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.2e-82 310.8 316 50.9
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 3.2e-80 302.8 326 52.1
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 6.1e-79 298.5 259 57.1
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 3.8e-73 279.3 379 46.4
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.2e-71 274.2 192 68.8
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.5e-69 267.3 213 64.3
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.5e-64 250.8 257 50.6
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 2.1e-63 246.9 176 67.0
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.5e-61 240.7 165 73.3
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 4.8e-60 235.7 263 50.2
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 7.0e-59 231.9 266 45.5
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 5.9e-58 228.8 263 43.7
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.9e-56 223.8 168 69.6
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 6.3e-52 208.8 146 69.9
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 5.2e-46 189.1 168 58.9
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.4e-43 181.0 176 55.1
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 2.6e-37 160.2 280 32.1
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 1.1e-32 144.8 144 52.1
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.8e-31 140.2 155 51.6
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.3e-30 137.1 167 51.5
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 4.9e-28 129.4 169 46.7
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.4e-27 127.9 198 43.4
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 3.2e-27 126.7 148 49.3
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 7.8e-26 122.1 107 57.0
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.0e-25 121.7 257 35.8
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.7e-25 120.9 218 33.9
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.0e-25 120.2 84 66.7
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.2e-23 114.8 97 60.8
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 7.6e-21 105.5 79 64.6
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.2e-19 100.1 69 66.7
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 7.1e-19 99.0 140 42.9
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 4.2e-11 73.2 92 50.0


User provided reference genes

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