Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR067330 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.1e-43 179.5 89 100.0
BcaC05g24568 Brassica carinata HOM05D000311 ORTHO05D000183 5.0e-15 84.3 75 64.0
BcaC03g15487 Brassica carinata HOM05D000311 ORTHO05D000183 8.6e-15 83.6 69 63.8
BcaB06g28018 Brassica carinata HOM05D000311 ORTHO05D000183 1.1e-14 83.2 71 63.4
BcaC08g45603 Brassica carinata HOM05D000311 ORTHO05D000183 1.1e-14 83.2 83 59.0
A04p19230 Brassica napus HOM05D000311 ORTHO05D000183 9.5e-14 80.1 64 68.8
AT1G74180 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.2e-13 79.7 89 52.8
BolC4t27017H Brassica oleracea HOM05D000311 ORTHO05D000183 1.6e-13 79.3 67 65.7
BcaB05g24838 Brassica carinata HOM05D000311 ORTHO05D000183 6.1e-13 77.4 93 49.5
CARHR060140 Cardamine hirsuta HOM05D000311 ORTHO05D000183 6.8e-12 73.9 70 62.9
BraA02t06962Z Brassica rapa HOM05D000311 ORTHO05D000183 8.9e-12 73.6 76 52.6
C06p48310 Brassica napus HOM05D000311 ORTHO05D000183 3.4e-11 71.6 99 47.5
BraA04t17523Z Brassica rapa HOM05D000022 ORTHO05D000183 4.4e-11 71.2 89 51.7
BolC6t39868H Brassica oleracea HOM05D000311 ORTHO05D000183 7.5e-11 70.5 72 58.3
A07p40040 Brassica napus HOM05D000311 ORTHO05D000183 2.2e-10 68.9 101 43.6
CARHR050360 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.2e-10 68.9 66 57.6
BolC2t09201H Brassica oleracea HOM05D000311 ORTHO05D000183 2.8e-10 68.6 57 68.4
BraA02t06964Z Brassica rapa HOM05D000311 ORTHO05D000183 3.7e-10 68.2 89 48.3
C02p31730 Brassica napus HOM05D000311 ORTHO05D000183 8.3e-10 67.0 64 60.9
BcaC08g46852 Brassica carinata HOM05D000311 ORTHO05D000183 1.4e-09 66.2 68 55.9
C02p31680 Brassica napus HOM05D000311 ORTHO05D000183 1.4e-09 66.2 66 54.5
CARHR067340 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.4e-09 65.5 60 60.0
CARHR067410 Cardamine hirsuta HOM05D000311 ORTHO05D000183 5.4e-09 64.3 66 53.0
AL4G16880 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 9.2e-09 63.5 67 50.7
AT2G25470 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 9.2e-09 63.5 89 44.9
A02p19140 Brassica napus HOM05D000311 ORTHO05D000183 1.2e-08 63.2 44 72.7
BraA07t30499Z Brassica rapa HOM05D000311 ORTHO05D000183 1.2e-08 63.2 66 53.0
BolC2t09204H Brassica oleracea HOM05D000094 ORTHO05D003883 2.7e-08 62.0 95 46.3
BolC3t13452H Brassica oleracea HOM05D000311 ORTHO05D000183 2.7e-08 62.0 66 54.5
CARHR067460 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.7e-08 62.0 44 72.7
Nn8g39606 Nelumbo nucifera HOM05D000311 ORTHO05D000183 2.7e-08 62.0 75 50.7
BcaB01g03008 Brassica carinata HOM05D000311 ORTHO05D000183 4.5e-08 61.2 66 54.5
C02p31770 Brassica napus HOM05D000311 ORTHO05D000183 4.5e-08 61.2 80 48.8
Sp5g29380 Schrenkiella parvula HOM05D000311 ORTHO05D000183 4.5e-08 61.2 57 61.4
AT1G74170 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 5.9e-08 60.8 93 44.1
C06p34920 Brassica napus HOM05D000311 ORTHO05D000183 5.9e-08 60.8 52 65.4
Carub.0004s0513 Capsella rubella HOM05D000311 ORTHO05D000183 5.9e-08 60.8 89 43.8
Thhalv10000451m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 7.8e-08 60.5 66 53.0
C04p51900 Brassica napus HOM05D000311 ORTHO05D000183 1.0e-07 60.1 43 74.4
BolC4t26761H Brassica oleracea HOM05D000311 ORTHO05D000183 1.0e-07 60.1 43 74.4
Carub.0004s0512 Capsella rubella HOM05D000311 ORTHO05D000183 1.0e-07 60.1 43 74.4
Thhalv10018074m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 1.3e-07 59.7 39 76.9
BolC6t39865H Brassica oleracea HOM05D000311 ORTHO05D000183 1.7e-07 59.3 83 44.6
CARHR067350 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.7e-07 59.3 43 74.4
C06p33540 Brassica napus HOM05D000311 ORTHO05D000183 2.3e-07 58.9 64 51.6
Thhalv10018087m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 2.3e-07 58.9 44 70.5
Thhalv10018093m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 2.3e-07 58.9 44 68.2
BcaC08g46822 Brassica carinata HOM05D000311 ORTHO05D000183 3.9e-07 58.2 44 70.5
Carub.0002s1339 Capsella rubella HOM05D000311 ORTHO05D000183 3.9e-07 58.2 47 66.0
AL1G64890 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 5.0e-07 57.8 67 49.3
A04p19700 Brassica napus HOM05D000311 ORTHO05D000183 5.0e-07 57.8 66 51.5
C04p55350 Brassica napus HOM05D000311 ORTHO05D000183 5.0e-07 57.8 66 51.5
BolC4t27071H Brassica oleracea HOM05D000311 ORTHO05D000183 5.0e-07 57.8 66 51.5
BraA04t17560Z Brassica rapa HOM05D000311 ORTHO05D000183 5.0e-07 57.8 66 51.5
AT5G49290 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 6.6e-07 57.4 47 61.7
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 6.6e-07 57.4 37 73.0
BraA07t31544Z Brassica rapa HOM05D000311 ORTHO05D000183 6.6e-07 57.4 57 54.4
Thhalv10018082m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 6.6e-07 57.4 44 70.5
AT1G74190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 8.6e-07 57.0 44 70.5
BcaC08g45538 Brassica carinata HOM05D000311 ORTHO05D000183 8.6e-07 57.0 66 50.0
C06p32150 Brassica napus HOM05D000311 ORTHO05D000183 8.6e-07 57.0 66 50.0
BolC6t38339H Brassica oleracea HOM05D000311 ORTHO05D000183 8.6e-07 57.0 66 50.0
Carub.0004s0515 Capsella rubella HOM05D000311 ORTHO05D000183 8.6e-07 57.0 81 49.4
CARHR067390 Cardamine hirsuta HOM05D000311 ORTHO05D000183 8.6e-07 57.0 42 71.4
AT1G58190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.1e-06 56.6 92 40.2
CARHR019250 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.1e-06 56.6 56 57.1
BraA07t30591Z Brassica rapa HOM05D000311 ORTHO05D000183 1.5e-06 56.2 73 50.7
AL2G34080 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 1.9e-06 55.8 44 70.5
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 1.9e-06 55.8 39 71.8
Aa31LG4G4490 Aethionema arabicum HOM05D000311 ORTHO05D000183 2.5e-06 55.5 79 44.3
AT1G54470 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.5e-06 55.5 68 50.0
C06p48370 Brassica napus HOM05D000311 ORTHO05D000183 4.3e-06 54.7 44 63.6
C06p21070 Brassica napus HOM05D000311 ORTHO05D000183 5.6e-06 54.3 64 50.0
BolC6t38467H Brassica oleracea HOM05D000311 ORTHO05D000183 5.6e-06 54.3 44 63.6
BcaB03g15370 Brassica carinata HOM05D000311 ORTHO05D000183 7.3e-06 53.9 44 61.4
A07p29500 Brassica napus HOM05D000311 ORTHO05D000183 9.5e-06 53.5 78 48.7
C06p33590 Brassica napus HOM05D000311 ORTHO05D000183 9.5e-06 53.5 84 44.0


User provided reference genes

Program Settings