Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.4e-125 453.0 224 100.0
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.2e-81 307.0 219 74.4
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 7.8e-65 251.1 228 61.0
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.4e-61 240.4 229 58.5
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 7.6e-60 234.6 230 57.8
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 2.4e-53 213.0 230 56.5
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 5.8e-52 208.4 229 55.0
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 7.6e-52 208.0 214 56.1
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.7e-51 206.8 231 57.1
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-51 204.9 224 53.6
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.1e-50 204.1 169 63.3
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-50 204.1 223 54.3
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-50 204.1 223 55.6
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-50 204.1 227 55.9
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-50 204.1 223 54.3
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-50 203.4 227 55.5
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-50 203.4 227 55.5
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-50 203.0 229 54.1
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 2.4e-50 203.0 229 54.1
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 3.2e-50 202.6 224 53.6
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 7.1e-50 201.4 223 55.2
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-49 200.3 220 55.5
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-49 199.1 219 53.9
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 7.8e-49 198.0 220 54.5
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-48 197.6 223 51.1
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-48 196.4 222 50.9
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-48 196.4 222 50.9
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-47 194.1 219 53.9
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-46 189.9 223 49.3
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 8.1e-46 188.0 222 50.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 8.1e-46 188.0 222 50.5
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 9.0e-45 184.5 234 51.3
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 1.5e-44 183.7 213 49.8
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-44 181.8 213 48.4
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 5.8e-44 181.8 213 48.4
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-43 180.3 223 52.0
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-43 180.3 223 52.0
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-43 180.3 213 49.3
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-43 180.3 213 49.3
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-42 177.6 224 50.4
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 3.2e-42 176.0 231 47.2
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.6e-41 173.7 221 50.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-40 171.0 221 49.8
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 3.9e-40 169.1 200 52.0
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 5.1e-40 168.7 222 48.6
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 5.1e-40 168.7 222 48.6
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 5.1e-40 168.7 222 48.6
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-39 165.6 221 47.1
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 5.6e-39 165.2 229 47.2
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 9.6e-39 164.5 227 46.7
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 9.6e-39 164.5 227 46.7
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 4.8e-38 162.2 221 47.5
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-37 160.2 213 47.4
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.7e-35 153.7 218 46.3
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-35 152.5 214 44.9
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 3.8e-35 152.5 214 44.9
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-35 152.5 190 48.9
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-35 152.5 214 44.9
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-34 151.0 221 45.7
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-34 151.0 214 44.9
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-34 151.0 214 44.9
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-34 150.6 214 45.3
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-33 146.4 225 44.0
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.7e-33 146.4 225 44.0
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-28 130.6 223 42.6
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-28 129.4 222 41.9
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 3.4e-28 129.4 232 41.8
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 7.6e-28 128.3 222 41.4
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-27 127.1 223 42.2
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-26 124.4 230 39.1
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-24 117.1 178 43.8
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-24 116.7 222 40.1
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 3.9e-24 115.9 128 53.1
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 8.7e-24 114.8 128 53.1
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 8.7e-24 114.8 232 37.5
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 1.5e-23 114.0 144 47.9
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 1.5e-23 114.0 144 47.9
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 1.5e-23 114.0 144 47.9
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-22 110.9 226 37.6
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 2.4e-21 106.7 213 39.0
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 2.4e-21 106.7 213 39.0
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 2.4e-21 106.7 213 39.0
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-20 103.6 217 37.3
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 2.0e-20 103.6 217 37.3
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 5.9e-20 102.1 237 35.4
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 7.6e-20 101.7 225 36.0
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-19 100.9 217 35.5
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-19 100.9 217 35.5
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-19 100.1 224 37.1
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-18 97.4 212 34.4
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 7.2e-18 95.1 228 36.8
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 3.6e-17 92.8 223 34.5
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.3e-16 90.9 223 34.1
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.8e-16 90.5 223 32.7
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 2.5e-15 86.7 222 32.0
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 9.7e-15 84.7 90 55.6
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 9.7e-15 84.7 90 55.6
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.2e-14 83.6 224 33.0
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-13 81.3 84 48.8
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 5.3e-13 79.0 195 33.8
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 1.7e-11 73.9 230 31.3
AT1G73330 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 2.5e-10 70.1 228 34.2
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 8.8e-08 61.6 127 36.2
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 9.7e-07 58.2 145 34.5
PSO017G1606 Papaver somniferum HOM05D000535 ORTHO05D000427 2.2e-06 57.0 220 29.5
THA.LOC104812189 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 2.2e-06 57.0 133 33.8
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-06 56.6 80 46.2
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 3.7e-06 56.2 66 51.5
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 3.7e-06 56.2 66 51.5
Lj2g0000790 Lotus japonicus HOM05D000535 ORTHO05D000427 4.8e-06 55.8 152 31.6
Lj2g0002029 Lotus japonicus HOM05D000535 ORTHO05D000427 4.8e-06 55.8 152 31.6


User provided reference genes

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