Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.7e-117 426.0 209 100.0
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 4.3e-49 198.7 219 50.2
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 9.5e-49 197.6 220 50.5
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 6.2e-48 194.9 214 50.0
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 6.2e-48 194.9 214 50.0
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 8.1e-48 194.5 219 50.7
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-47 194.1 215 50.2
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.2e-46 190.7 219 48.4
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-46 190.3 213 50.2
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-46 190.3 213 50.2
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 2.6e-46 189.5 213 50.2
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-46 188.0 213 48.8
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 9.9e-46 187.6 215 49.3
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 9.9e-46 187.6 219 50.2
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-44 183.0 215 48.8
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 1.2e-43 180.6 214 48.1
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-43 179.5 217 47.0
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-43 179.5 217 47.0
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-43 178.3 214 47.2
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-43 178.3 214 47.2
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-41 173.3 215 47.9
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-41 173.3 217 48.4
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 3.3e-41 172.6 209 46.4
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-40 170.6 217 46.1
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-40 170.6 217 46.1
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-40 170.6 215 47.4
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-40 170.6 217 46.1
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-40 170.6 215 47.4
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.6e-40 170.2 205 46.3
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 3.6e-40 169.1 209 45.9
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 3.6e-40 169.1 209 45.9
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-39 167.5 194 46.9
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-39 167.2 216 46.3
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-39 167.2 210 44.8
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.4e-39 167.2 210 44.8
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 3.1e-39 166.0 203 43.8
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 3.1e-39 166.0 214 45.8
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 4.0e-39 165.6 215 47.9
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-38 162.9 215 47.4
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 4.4e-38 162.2 220 47.3
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 8.4e-37 157.9 206 43.7
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.4e-36 156.4 218 46.3
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-35 154.1 206 43.7
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-35 152.5 215 44.7
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 3.5e-35 152.5 215 44.7
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 7.8e-35 151.4 215 42.8
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 6.6e-34 148.3 176 46.6
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-31 140.6 211 46.0
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-31 140.6 211 46.0
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-31 140.6 211 46.0
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-30 137.5 219 45.2
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-30 137.5 219 45.2
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.2e-30 137.5 219 45.2
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-30 137.1 211 45.0
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-30 137.1 211 45.0
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-30 137.1 226 42.5
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 5.8e-30 135.2 220 39.5
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-30 135.2 226 42.0
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 9.9e-30 134.4 157 51.0
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.3e-29 134.0 223 42.2
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-29 131.7 210 38.1
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-28 130.2 218 42.7
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-28 130.2 218 42.7
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-27 127.1 224 41.1
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-23 114.4 216 40.3
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 1.5e-22 110.5 214 38.8
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-22 110.5 216 39.4
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-22 109.8 214 38.8
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-21 106.7 224 37.1
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-21 105.9 216 38.4
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.2e-20 102.8 216 36.1
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-20 102.4 124 47.6
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-19 99.8 124 46.8
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 7.9e-19 98.2 140 42.9
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 7.9e-19 98.2 140 42.9
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 7.9e-19 98.2 140 42.9
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 6.7e-18 95.1 196 32.1
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 3.3e-17 92.8 213 35.7
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 4.8e-16 89.0 188 36.2
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 6.2e-16 88.6 170 34.1
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.8e-15 87.0 156 39.7
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.6e-14 81.6 142 38.7
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 1.3e-13 80.9 195 30.3
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 1.3e-13 80.9 195 30.3
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 1.3e-13 80.9 195 30.3
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-13 80.5 96 46.9
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-12 77.4 223 33.2
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-12 75.9 205 32.7
THA.LOC104812190 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.1e-12 75.1 150 35.3
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.1e-12 75.1 136 38.2
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.1e-12 75.1 161 36.0
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 6.1e-11 72.0 194 35.1
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 3.0e-10 69.7 145 36.6
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-09 67.8 87 42.5
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-09 67.8 87 42.5
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 1.5e-09 67.4 198 29.8
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 7.4e-09 65.1 71 45.1
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-08 64.3 207 30.9
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 1.6e-08 63.9 74 43.2
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 1.6e-08 63.9 74 43.2
THA.LOC104812189 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 4.8e-08 62.4 147 31.3
CARHR066380 Cardamine hirsuta HOM05D000535 ORTHO05D000427 6.3e-08 62.0 132 36.4
AT1G17860 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 8.2e-08 61.6 158 32.9
Sed0020580 Sechium edule HOM05D000535 ORTHO05D000427 1.1e-07 61.2 143 32.9
Potri.017G153200 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.6e-06 56.6 153 30.7
CsaV3_1G007570 Cucumis sativus L. HOM05D000535 ORTHO05D000427 4.5e-06 55.8 131 29.0
Atru.chr6.1204 Acer truncatum HOM05D000535 ORTHO05D000427 5.9e-06 55.5 165 27.3
Cc00_g21930 Coffea canephora HOM05D000535 ORTHO05D000427 1.0e-05 54.7 128 32.0


User provided reference genes

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