Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.7e-76 288.1 145 100.0
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 6.4e-44 181.0 117 82.1
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 8.4e-36 154.1 116 69.0
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 9.3e-35 150.6 120 65.8
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.6e-34 149.8 125 63.2
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 3.5e-34 148.7 122 63.9
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 4.6e-34 148.3 123 65.9
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-33 147.1 120 65.0
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-33 147.1 120 65.0
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 1.3e-33 146.7 134 59.0
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-33 146.4 134 59.7
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 4.3e-32 141.7 117 64.1
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 4.3e-32 141.7 117 64.1
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.1e-31 139.4 136 52.9
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-31 139.4 117 62.4
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 2.1e-31 139.4 117 62.4
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.8e-31 139.0 126 58.7
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.8e-31 138.3 108 68.5
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 6.9e-30 134.4 118 58.5
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 6.9e-30 134.4 118 58.5
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 2.6e-29 132.5 108 63.9
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 5.8e-29 131.3 131 51.9
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 5.8e-29 131.3 131 51.9
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.6e-29 131.0 96 70.8
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 7.6e-29 131.0 121 56.2
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 7.6e-29 131.0 122 55.7
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-27 126.7 116 56.0
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 1.4e-27 126.7 116 56.0
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 7.1e-27 124.4 118 53.4
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-25 120.2 118 54.2
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.3e-25 119.4 116 53.4
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.9e-24 116.3 124 51.6
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.8e-23 112.5 129 48.1
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-22 109.8 118 52.5
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.3e-20 103.6 115 44.3
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-20 103.6 119 43.7
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 2.9e-20 102.4 133 42.9
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.8e-20 102.1 120 45.8
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.1e-19 100.5 147 41.5
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-19 99.4 125 45.6
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 2.5e-19 99.4 125 45.6
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.6e-18 96.7 120 43.3
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-18 96.3 126 44.4
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-17 94.0 121 43.8
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.8e-17 93.2 116 44.0
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.3e-17 92.8 141 38.3
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 3.0e-17 92.4 112 50.9
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 5.1e-17 91.7 141 38.3
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 5.1e-17 91.7 141 38.3
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-16 90.1 75 61.3
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 1.5e-16 90.1 122 38.5
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 3.3e-16 89.0 78 57.7
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 4.3e-16 88.6 141 37.6
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 4.3e-16 88.6 141 36.9
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.7e-16 88.2 96 46.9
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 7.4e-16 87.8 113 43.4
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 9.7e-16 87.4 117 45.3
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-14 83.6 88 51.1
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 1.4e-14 83.6 109 45.0
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 4.1e-14 82.0 95 48.4
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 5.3e-14 81.6 134 39.6
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.6e-13 79.3 114 43.9
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-12 75.9 64 57.8
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 6.5e-12 74.7 122 36.1
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-11 73.6 69 55.1
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 7.2e-11 71.2 127 40.2
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 9.4e-11 70.9 89 44.9
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 6.7e-09 64.7 112 35.7
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 6.7e-09 64.7 112 35.7
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.2e-07 59.7 52 53.8
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.4e-06 56.2 50 56.0
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-06 56.2 57 45.6
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 4.1e-06 55.5 82 41.5


User provided reference genes

Program Settings