Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.7e-85 319.3 159 100.0
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.4e-46 188.7 136 68.4
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.3e-41 171.8 131 66.4
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-39 167.2 118 69.5
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.1e-39 167.2 141 58.9
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-38 163.7 133 60.9
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.2e-38 163.7 133 60.9
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.5e-38 163.3 110 72.7
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-37 159.1 131 60.3
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-37 159.1 131 60.3
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 8.3e-37 157.5 141 56.0
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-36 156.8 141 56.0
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-36 156.0 136 58.8
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 3.2e-36 155.6 140 57.9
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 3.2e-36 155.6 140 57.9
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 9.2e-36 154.1 140 57.9
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 9.2e-36 154.1 140 57.9
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-35 153.7 133 56.4
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 1.2e-35 153.7 133 57.9
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.6e-35 153.3 135 52.6
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-35 152.9 141 54.6
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 2.1e-35 152.9 141 54.6
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 2.7e-35 152.5 141 53.9
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-35 152.1 140 55.7
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-35 152.1 140 55.7
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 4.3e-33 145.2 140 55.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 4.3e-33 145.2 140 55.0
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 4.3e-33 145.2 141 51.8
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 5.6e-33 144.8 119 59.7
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.6e-32 143.3 130 54.6
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.9e-29 131.7 116 56.9
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 1.9e-28 129.8 102 62.7
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 3.2e-28 129.0 104 61.5
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.2e-28 129.0 118 52.5
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 2.7e-27 125.9 117 52.1
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 3.5e-27 125.6 117 57.3
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 2.3e-26 122.9 118 51.7
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 8.6e-26 120.9 114 54.4
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 8.6e-26 120.9 114 54.4
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.5e-25 119.4 114 54.4
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.3e-25 119.0 137 46.7
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 5.6e-25 118.2 118 50.8
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 5.6e-25 118.2 118 50.8
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 5.6e-25 118.2 118 50.8
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 1.6e-24 116.7 140 45.0
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 1.6e-24 116.7 118 50.0
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-24 115.9 112 53.6
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 3.6e-24 115.5 89 64.0
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-24 115.2 118 50.0
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-23 113.6 138 44.2
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.8e-23 113.2 138 43.5
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.4e-23 112.8 116 53.4
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 4.4e-22 108.6 144 40.3
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 7.6e-22 107.8 137 43.8
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 1.3e-21 107.1 117 47.9
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.9e-21 105.9 137 42.3
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 6.4e-21 104.8 77 64.9
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 8.4e-21 104.4 141 42.6
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 1.9e-20 103.2 132 41.7
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 1.9e-20 103.2 132 41.7
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.4e-20 101.7 76 69.7
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-18 97.4 99 50.5
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.3e-18 97.1 142 40.1
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-17 93.6 84 56.0
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-17 93.6 103 46.6
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 7.3e-17 91.3 80 55.0
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.3e-16 90.5 140 39.3
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 6.2e-16 88.2 132 38.6
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-15 87.0 101 46.5
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 2.0e-14 83.2 115 45.2
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 1.6e-11 73.6 98 48.0
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.9e-09 66.6 67 46.3
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.9e-09 66.6 51 56.9
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 7.3e-09 64.7 137 30.7
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 2.1e-08 63.2 53 54.7
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 3.4e-06 55.8 57 42.1


User provided reference genes

Program Settings