Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR061330 Cardamine hirsuta HOM05D011059 ORTHO05D010229 1.6e-34 149.1 86 100.0
Carub.0002s1507 Capsella rubella HOM05D011059 ORTHO05D010229 7.5e-24 113.6 91 71.4
BolC6t38857H Brassica oleracea HOM05D011059 ORTHO05D010229 8.3e-23 110.2 88 72.7
BraA07t30825Z Brassica rapa HOM05D011059 ORTHO05D010229 1.1e-22 109.8 88 72.7
A02p15160 Brassica napus HOM05D011059 ORTHO05D010229 1.6e-21 105.9 86 68.6
BraA02t06581Z Brassica rapa HOM05D011059 ORTHO05D010229 1.6e-21 105.9 86 68.6
C02p24890 Brassica napus HOM05D011059 ORTHO05D010229 2.2e-20 102.1 82 68.3
BolC2t08582H Brassica oleracea HOM05D011059 ORTHO05D010229 2.2e-20 102.1 82 68.3
BolC6t39287H Brassica oleracea HOM05D011059 ORTHO05D010229 3.8e-20 101.3 89 73.0
BcaB05g24396 Brassica carinata HOM05D011059 ORTHO05D010229 1.1e-19 99.8 114 53.5
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 5.2e-17 90.9 89 61.8
BcaC08g45966 Brassica carinata HOM05D011059 ORTHO05D002300 4.1e-14 81.3 80 60.0
Thhalv10009808m.g Eutrema salsugineum HOM05D011059 ORTHO05D010229 7.0e-14 80.5 89 56.2
Aa31LG7G9030 Aethionema arabicum HOM05D011059 ORTHO05D010229 1.0e-12 76.6 84 53.6
BcaB03g15425 Brassica carinata HOM05D011059 ORTHO05D002300 1.0e-12 76.6 85 57.6
Carub.0001s2501 Capsella rubella HOM05D011059 ORTHO05D010229 1.7e-12 75.9 91 53.8
Aa31sc621G20 Aethionema arabicum HOM05D011059 ORTHO05D010229 6.6e-12 73.9 80 61.2
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 2.0e-08 62.4 85 42.4
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 9.8e-08 60.1 46 60.9
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.7e-07 59.3 44 61.4
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.2e-07 58.9 44 61.4
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.8e-07 58.5 44 61.4
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 6.3e-07 57.4 46 54.3
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 8.3e-07 57.0 38 63.2
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 8.3e-07 57.0 43 60.5
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 1.1e-06 56.6 46 58.7
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.4e-06 56.2 44 54.5
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.8e-06 55.8 85 38.8
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.8e-06 55.8 44 54.5
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 1.8e-06 55.8 44 54.5
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 2.4e-06 55.5 88 42.0
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 2.4e-06 55.5 37 67.6
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 2.4e-06 55.5 44 56.8
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 3.1e-06 55.1 46 56.5
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 4.1e-06 54.7 45 55.6
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 4.1e-06 54.7 46 54.3
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 5.4e-06 54.3 49 53.1
CARHR025990 Cardamine hirsuta HOM05D011059 ORTHO05D002300 7.0e-06 53.9 49 55.1
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 9.2e-06 53.5 53 49.1
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 9.2e-06 53.5 40 62.5


User provided reference genes

Program Settings