Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 3.2e-84 315.1 162 100.0
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 2.4e-63 245.7 162 82.7
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.0e-61 240.4 162 82.1
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 3.8e-61 238.4 164 81.7
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 2.3e-58 229.2 170 75.3
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 5.7e-57 224.6 164 74.4
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 9.0e-55 217.2 165 72.1
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 9.0e-55 217.2 165 72.1
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 9.0e-55 217.2 165 72.1
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 1.5e-54 216.5 166 74.7
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 4.5e-54 214.9 164 73.2
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 6.7e-50 201.1 166 69.3
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 4.5e-30 135.2 168 50.6
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 5.3e-23 111.7 163 42.3
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.2e-21 106.3 161 44.7
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 2.7e-19 99.4 164 42.1
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.8e-18 96.7 139 42.4
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 2.3e-18 96.3 163 40.5
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.2e-17 94.0 161 39.1
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.5e-17 93.6 161 41.6
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 2.6e-17 92.8 162 40.1
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 1.1e-15 87.4 160 35.6
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 1.8e-15 86.7 168 38.1
C06p38420 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-15 85.9 87 63.2
BolC6t38941H Brassica oleracea HOM05D000305 ORTHO05D000065 3.1e-15 85.9 87 63.2
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 3.1e-15 85.9 141 42.6
A02p14900 Brassica napus HOM05D007903 ORTHO05D009925 4.1e-15 85.5 54 75.9
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 7.0e-15 84.7 165 36.4
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 9.1e-15 84.3 171 39.2
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 1.6e-14 83.6 157 41.4
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 4.5e-14 82.0 166 39.8
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 1.0e-13 80.9 166 36.1
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 6.5e-13 78.2 171 32.7
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 8.5e-13 77.8 165 38.8
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 3.2e-12 75.9 163 33.7
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 3.6e-11 72.4 153 35.3
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 8.0e-11 71.2 165 33.9
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.0e-10 70.9 169 37.3
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 1.0e-10 70.9 168 34.5
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 1.8e-10 70.1 172 37.2
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.8e-10 70.1 165 33.9
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 2.3e-10 69.7 164 34.8
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 3.0e-10 69.3 169 37.9
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 3.0e-10 69.3 169 37.9
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 3.0e-10 69.3 163 36.8
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 4.0e-10 68.9 171 30.4
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 5.2e-10 68.6 156 35.9
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 6.8e-10 68.2 169 37.9
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 6.8e-10 68.2 136 32.4
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 6.8e-10 68.2 169 35.5
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 8.8e-10 67.8 172 34.9
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 8.8e-10 67.8 175 33.1
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 4.4e-09 65.5 157 37.6
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.7e-09 65.1 170 34.7
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 9.8e-09 64.3 156 35.9
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 1.7e-08 63.5 170 34.1
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.7e-08 63.5 170 34.1
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.7e-08 63.5 166 30.1
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 2.8e-08 62.8 138 32.6
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 3.7e-08 62.4 168 36.3
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.7e-08 62.4 166 30.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 8.3e-08 61.2 169 32.5
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 1.1e-07 60.8 132 31.8
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 1.1e-07 60.8 161 32.3
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 4.1e-07 58.9 130 35.4
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 7.0e-07 58.2 169 29.0
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 7.7e-06 54.7 161 32.9


User provided reference genes

Program Settings