Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR059610 Cardamine hirsuta HOM05D000056 ORTHO05D030979 1.3e-27 125.6 60 100.0
AL2G25640 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 1.3e-14 82.4 49 83.7
AT1G67150 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 2.4e-13 78.2 49 79.6
CARHR154310 Cardamine hirsuta HOM05D000056 ORTHO05D000019 7.1e-13 76.6 48 70.8
Carub.0002s1195 Capsella rubella HOM05D000056 ORTHO05D000019 3.6e-09 64.3 44 59.1
AL2G23580 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 2.3e-08 61.6 38 68.4
Carub.0002s1196 Capsella rubella HOM05D000056 ORTHO05D000019 2.3e-08 61.6 36 69.4
AT1G65985 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 3.1e-08 61.2 53 52.8
AT2G28580 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 5.2e-08 60.5 37 73.0
AL4G23070 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 8.9e-08 59.7 37 73.0
BraA04t15882Z Brassica rapa HOM05D000056 ORTHO05D000019 8.9e-08 59.7 37 70.3
CARHR121990 Cardamine hirsuta HOM05D000056 ORTHO05D000019 8.9e-08 59.7 44 63.6
BcaC02g10050 Brassica carinata HOM05D000056 ORTHO05D000019 2.0e-07 58.5 37 67.6
C04p33490 Brassica napus HOM05D000056 ORTHO05D000019 2.0e-07 58.5 37 67.6
BolC4t24913H Brassica oleracea HOM05D000056 ORTHO05D000019 2.0e-07 58.5 37 67.6
A04p02230 Brassica napus HOM05D000056 ORTHO05D000019 2.6e-07 58.2 37 67.6
BraA04t15953Z Brassica rapa HOM05D000056 ORTHO05D000019 2.6e-07 58.2 37 67.6
AT3G60470 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 3.4e-07 57.8 44 63.6
Aa31LG10G14570 Aethionema arabicum HOM05D000056 ORTHO05D000019 4.4e-07 57.4 38 65.8
Aa31LG1G26530 Aethionema arabicum HOM05D000056 ORTHO05D000019 4.4e-07 57.4 48 58.3
Carub.0004s2754 Capsella rubella HOM05D000056 ORTHO05D000019 4.4e-07 57.4 35 71.4
Sp5g02750 Schrenkiella parvula HOM05D000056 ORTHO05D000019 4.4e-07 57.4 37 67.6
AL4G44040 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 5.8e-07 57.0 39 66.7
CARHR170820 Cardamine hirsuta HOM05D000056 ORTHO05D000019 5.8e-07 57.0 41 61.0
Thhalv10005294m.g Eutrema salsugineum HOM05D000056 ORTHO05D000019 5.8e-07 57.0 41 61.0
Sp5g02760 Schrenkiella parvula HOM05D000056 ORTHO05D000019 5.8e-07 57.0 41 63.4
Carub.0005s2720 Capsella rubella HOM05D000056 ORTHO05D000019 7.6e-07 56.6 35 71.4
CARHR140170 Cardamine hirsuta HOM05D000056 ORTHO05D000019 7.6e-07 56.6 35 71.4
Sp4g27010 Schrenkiella parvula HOM05D000056 ORTHO05D000019 7.6e-07 56.6 35 71.4
Sp6g22040 Schrenkiella parvula HOM05D000056 ORTHO05D000019 7.6e-07 56.6 42 61.9
Aa31LG10G14690 Aethionema arabicum HOM05D000056 ORTHO05D000019 9.9e-07 56.2 37 62.2
Aa31LG1G26520 Aethionema arabicum HOM05D000056 ORTHO05D030979 9.9e-07 56.2 37 70.3
AT2G44930 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 9.9e-07 56.2 35 71.4
Aa31LG10G14540 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.3e-06 55.8 38 65.8
Thhalv10013719m.g Eutrema salsugineum HOM05D000056 ORTHO05D000019 1.3e-06 55.8 34 70.6
THA.LOC104802485 Tarenaya hassleriana HOM05D000056 ORTHO05D000019 1.3e-06 55.8 35 65.7
Aa31LG10G14670 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.7e-06 55.5 37 62.2
BcaB02g08965 Brassica carinata HOM05D000056 ORTHO05D000019 1.7e-06 55.5 35 71.4
BcaC07g42778 Brassica carinata HOM05D000056 ORTHO05D000019 1.7e-06 55.5 42 59.5
Manes.12G124700 Manihot esculenta HOM05D000056 ORTHO05D000019 1.7e-06 55.5 38 60.5
Aa31LG10G14610 Aethionema arabicum HOM05D000056 ORTHO05D000019 2.2e-06 55.1 37 56.8
Aa31LG1G26490 Aethionema arabicum HOM05D000056 ORTHO05D000019 2.2e-06 55.1 29 79.3
BcaC07g40568 Brassica carinata HOM05D000056 ORTHO05D000019 2.2e-06 55.1 37 64.9
BcaC07g42776 Brassica carinata HOM05D000056 ORTHO05D000019 2.2e-06 55.1 37 64.9
A07p25090 Brassica napus HOM05D000056 ORTHO05D000019 2.2e-06 55.1 41 61.0
BolC4t24763H Brassica oleracea HOM05D000056 ORTHO05D000019 2.2e-06 55.1 37 67.6
BraA07t30149Z Brassica rapa HOM05D000056 ORTHO05D000019 2.2e-06 55.1 41 61.0
A05p05050 Brassica napus HOM05D000056 ORTHO05D000019 2.9e-06 54.7 35 68.6
BraA05t19479Z Brassica rapa HOM05D000056 ORTHO05D000019 2.9e-06 54.7 35 68.6
Carub.0005s2719 Capsella rubella HOM05D000056 ORTHO05D000019 2.9e-06 54.7 41 61.0
CARHR069160 Cardamine hirsuta HOM05D000056 ORTHO05D030979 2.9e-06 54.7 37 64.9
Manes.12G125100 Manihot esculenta HOM05D000056 ORTHO05D000019 2.9e-06 54.7 38 60.5
Aa31LG10G14730 Aethionema arabicum HOM05D000056 ORTHO05D000019 3.7e-06 54.3 37 62.2
BcaC08g45062 Brassica carinata HOM05D000056 ORTHO05D000019 3.7e-06 54.3 41 61.0
C06p26700 Brassica napus HOM05D000056 ORTHO05D000019 3.7e-06 54.3 41 61.0
BolC6t37836H Brassica oleracea HOM05D000056 ORTHO05D000019 3.7e-06 54.3 41 61.0
BolC6t37846H Brassica oleracea HOM05D000056 ORTHO05D000019 3.7e-06 54.3 41 61.0
Aa31LG10G14590 Aethionema arabicum HOM05D000056 ORTHO05D000019 4.9e-06 53.9 44 56.8
BcaB02g07416 Brassica carinata HOM05D000056 ORTHO05D000019 4.9e-06 53.9 41 61.0
A09p52720 Brassica napus HOM05D000056 ORTHO05D000019 4.9e-06 53.9 41 61.0
C08p35460 Brassica napus HOM05D000056 ORTHO05D000019 4.9e-06 53.9 41 61.0
BraA09t40703Z Brassica rapa HOM05D000056 ORTHO05D000019 4.9e-06 53.9 41 61.0
Thhalv10006372m.g Eutrema salsugineum HOM05D000056 ORTHO05D000019 4.9e-06 53.9 41 58.5
QL04p032904 Quercus lobata HOM05D000056 ORTHO05D000019 4.9e-06 53.9 40 55.0
Aa31LG10G14700 Aethionema arabicum HOM05D000056 ORTHO05D000019 6.4e-06 53.5 37 59.5
BcaC07g40566 Brassica carinata HOM05D000056 ORTHO05D000019 6.4e-06 53.5 41 58.5
BolC8t51137H Brassica oleracea HOM05D000056 ORTHO05D000019 6.4e-06 53.5 41 58.5


User provided reference genes

Program Settings