Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR054560 Cardamine hirsuta HOM05D000760 ORTHO05D116253 3.9e-27 124.0 60 100.0
THA.LOC104820379 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 3.4e-07 57.8 76 46.1
BcaC04g22086 Brassica carinata HOM05D000760 ORTHO05D000618 4.4e-07 57.4 76 44.7
C09p23630 Brassica napus HOM05D000760 ORTHO05D000618 4.4e-07 57.4 76 44.7
BolC9t55283H Brassica oleracea HOM05D000760 ORTHO05D000618 4.4e-07 57.4 76 44.7
BcaC09g49532 Brassica carinata HOM05D000760 ORTHO05D000618 5.8e-07 57.0 76 44.7
C01p35510 Brassica napus HOM05D000760 ORTHO05D014827 5.8e-07 57.0 76 44.7
BolC1t03510H Brassica oleracea HOM05D000760 ORTHO05D000618 5.8e-07 57.0 76 44.7
A01p27940 Brassica napus HOM05D000760 ORTHO05D000618 7.6e-07 56.6 76 44.7
BraA01t02931Z Brassica rapa HOM05D000760 ORTHO05D000618 7.6e-07 56.6 76 44.7
THA.LOC104823708 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 7.6e-07 56.6 76 44.7
Thhalv10023686m.g Eutrema salsugineum HOM05D000760 ORTHO05D000618 9.9e-07 56.2 76 44.7
Sp2g05840 Schrenkiella parvula HOM05D000760 ORTHO05D000618 9.9e-07 56.2 76 44.7
Carub.0002s0701 Capsella rubella HOM05D000760 ORTHO05D000618 1.3e-06 55.8 76 43.4
AL1G20110 Arabidopsis lyrata HOM05D000760 ORTHO05D000618 1.7e-06 55.5 76 44.7
AL1G67200 Arabidopsis lyrata HOM05D000760 ORTHO05D000618 1.7e-06 55.5 76 43.4
CARHR009560 Cardamine hirsuta HOM05D000760 ORTHO05D000618 1.7e-06 55.5 76 43.4
BcaB04g20170 Brassica carinata HOM05D000760 ORTHO05D000618 2.2e-06 55.1 76 43.4
BcaB04g20171 Brassica carinata HOM05D000760 ORTHO05D000618 2.2e-06 55.1 76 43.4
CARHR054650 Cardamine hirsuta HOM05D000760 ORTHO05D000618 2.2e-06 55.1 73 46.6
THA.LOC104816834 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 2.2e-06 55.1 76 43.4
A09p18850 Brassica napus HOM05D000760 ORTHO05D000618 2.9e-06 54.7 76 43.4
BraA09t37506Z Brassica rapa HOM05D000760 ORTHO05D000618 2.9e-06 54.7 76 43.4
AT1G09580 Arabidopsis thaliana HOM05D000760 ORTHO05D000618 3.7e-06 54.3 76 43.4
AT1G57620 Arabidopsis thaliana HOM05D000760 ORTHO05D000618 3.7e-06 54.3 76 42.1
C05p07630 Brassica napus HOM05D000760 ORTHO05D000618 3.7e-06 54.3 76 39.5
BolC5t29515H Brassica oleracea HOM05D000760 ORTHO05D000618 3.7e-06 54.3 76 39.5
Carub.0001s0893 Capsella rubella HOM05D000760 ORTHO05D000618 3.7e-06 54.3 76 42.1
A06p06290 Brassica napus HOM05D000760 ORTHO05D000618 4.9e-06 53.9 76 39.5
BraA06t23839Z Brassica rapa HOM05D000760 ORTHO05D000618 4.9e-06 53.9 76 39.5
Thhalv10008686m.g Eutrema salsugineum HOM05D000760 ORTHO05D000618 8.4e-06 53.1 76 40.8


User provided reference genes

Program Settings