Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR053110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.7e-51 203.4 93 100.0
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.1e-31 138.3 82 78.0
CARHR186290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.6e-24 114.8 80 62.5
Carub.0004s0100 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-22 109.4 84 64.3
Carub.0004s0107 Capsella rubella HOM05D000171 ORTHO05D000101 2.9e-21 105.1 84 60.7
Carub.0004s0104 Capsella rubella HOM05D000171 ORTHO05D000101 4.9e-21 104.4 83 61.4
AT2G21930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.6e-19 97.8 84 54.8
AL4G11220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-18 96.3 75 64.0
AL4G11250 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-18 95.9 84 54.8
AL4G11240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.9e-18 94.7 85 54.1
AL3G53950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-18 94.4 76 61.8
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 5.1e-18 94.4 89 56.2
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-18 94.0 89 55.1
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-18 94.0 89 55.1
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-17 93.2 89 55.1
Thhalv10000190m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.1e-16 89.0 88 54.5
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 2.8e-16 88.6 89 52.8
Carub.0003s2443 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-16 88.6 69 63.8
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 8.1e-16 87.0 89 52.8
Carub.0007s2700 Capsella rubella HOM05D000171 ORTHO05D000101 8.1e-16 87.0 79 50.6
Thhalv10009644m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.8e-13 78.2 87 48.3
CARHR078280 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-12 76.3 64 59.4
AL7G10750 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-12 75.5 93 41.9
CARHR078290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.0e-11 70.9 57 59.6
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-10 69.3 88 43.2
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-10 68.6 88 43.2
CARHR220790 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.1e-10 67.8 89 43.8
Thhalv10000505m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.7e-10 67.0 66 50.0
Carub.0001s0357 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-09 65.5 92 39.1
Thhalv10007859m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.3e-09 64.7 96 38.5
Carub.0004s0536 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-08 62.8 77 41.6
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-08 62.8 86 41.9
BcaC09g50159 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-08 62.4 69 50.7
Thhalv10019467m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.1e-08 62.4 84 41.7
AL5G29234 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-08 61.6 87 36.8
C01p28340 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-08 61.6 69 50.7
A01p22770 Brassica napus HOM05D000171 ORTHO05D000101 4.8e-08 61.2 78 43.6
BraA01t02190Z Brassica rapa HOM05D000171 ORTHO05D000101 4.8e-08 61.2 78 43.6
Thhalv10011044m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-07 60.1 93 38.7
A08p23970 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-07 59.7 78 43.6
Carub.0001s2013 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-07 59.7 83 43.4
Carub.0004s0538 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-07 59.7 66 48.5
BraA03t10159Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-07 59.3 91 38.5
Carub.0002s0292 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-07 59.3 76 39.5
CARHR126110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.8e-07 59.3 70 47.1
AT1G53790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-07 58.9 92 37.0
AT3G49450 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-07 58.9 94 36.2
BcaB05g24068 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-07 58.5 70 48.6
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-07 58.5 92 38.0
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-07 58.5 92 38.0
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 3.1e-07 58.5 92 38.0
Aa31LG4G9200 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.0e-07 58.2 92 33.7
BolC8t50066H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-07 58.2 71 49.3
Carub.0004s0102 Capsella rubella HOM05D000171 ORTHO05D000101 4.0e-07 58.2 76 50.0
Carub.0004s0106 Capsella rubella HOM05D000171 ORTHO05D000101 5.3e-07 57.8 85 44.7
Carub.0004s1097 Capsella rubella HOM05D000171 ORTHO05D000101 5.3e-07 57.8 86 39.5
BcaB02g10631 Brassica carinata HOM05D000171 ORTHO05D000101 6.9e-07 57.4 71 50.7
Carub.0002s0293 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-06 56.6 70 45.7
Thhalv10011080m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-06 56.6 70 47.1
Thhalv10012287m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-06 56.6 72 44.4
BcaB01g00705 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-06 56.2 70 42.9
Sp5g12630 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.5e-06 56.2 94 37.2
Aa31LG11G13910 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.0e-06 55.8 74 37.8
AL1G49450 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-06 55.8 74 36.5
AL1G39230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.6e-06 55.5 91 36.3
AT1G47810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.6e-06 55.5 69 47.8
A06p18290 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-06 55.5 71 46.5
BraA06t24912Z Brassica rapa HOM05D000171 ORTHO05D000101 2.6e-06 55.5 71 46.5
Carub.0001s3186 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-06 55.1 92 38.0
Carub.0004s0537 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-06 55.1 71 45.1
Thhalv10009934m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-06 55.1 87 41.4
Thhalv10012324m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-06 55.1 72 45.8
Aa31LG10G1480 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.4e-06 54.7 93 34.4
BcaB01g02793 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-06 54.7 81 40.7
BcaC07g39412 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-06 54.7 70 40.0
C08p24480 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 54.7 71 45.1
BolC8t50068H Brassica oleracea HOM05D000171 ORTHO05D000101 4.4e-06 54.7 70 40.0
BraA01t03932Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-06 54.7 77 42.9
Carub.0006s2776 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-06 54.7 70 42.9
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.4e-06 54.7 93 39.8
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-06 54.7 85 36.5
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-06 54.7 85 36.5
Aa31LG6G10760 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.8e-06 54.3 83 36.1
C08p24500 Brassica napus HOM05D000171 ORTHO05D000101 5.8e-06 54.3 70 40.0
Sp3g17210 Schrenkiella parvula HOM05D000171 ORTHO05D000101 5.8e-06 54.3 95 41.1
Sp7g24400 Schrenkiella parvula HOM05D000171 ORTHO05D000101 5.8e-06 54.3 86 36.0
Aa31LG4G12440 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.6e-06 53.9 79 38.0
Aa31LG6G7120 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.6e-06 53.9 79 36.7
Carub.0001s4256 Capsella rubella HOM05D000171 ORTHO05D000101 7.6e-06 53.9 69 43.5
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.9e-06 53.5 86 40.7
AT1G26510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.9e-06 53.5 92 34.8
A01p38860 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-06 53.5 77 40.3
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-06 53.5 71 43.7
A06p18280 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-06 53.5 70 38.6
BraA06t24911Z Brassica rapa HOM05D000171 ORTHO05D000101 9.9e-06 53.5 70 38.6


User provided reference genes

Program Settings