Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 1.5e-36 155.6 76 100.0
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 3.6e-22 107.8 72 70.8
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 3.1e-21 104.8 73 68.5
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 1.7e-19 99.0 75 61.3
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 4.9e-19 97.4 76 63.2
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 8.3e-19 96.7 73 64.4
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 63.5
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 63.5
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 63.5
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 62.2
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 62.2
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 6.0e-17 90.5 74 62.2
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.3e-16 89.4 67 62.7
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-16 89.0 73 63.0
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 1.7e-16 89.0 73 63.0
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 2.3e-16 88.6 73 58.9
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 2.3e-16 88.6 73 58.9
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 2.3e-16 88.6 73 58.9
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 61.6
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 58.9
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 58.9
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 58.9
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 3.9e-16 87.8 72 61.1
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 5.1e-16 87.4 74 62.2
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 6.6e-16 87.0 73 58.9
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 8.6e-16 86.7 73 61.6
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 1.9e-15 85.5 73 57.5
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 3.3e-15 84.7 74 59.5
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 3.3e-15 84.7 73 57.5
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 3.3e-15 84.7 73 57.5
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 3.3e-15 84.7 74 59.5
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 3.3e-15 84.7 73 57.5
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 3.3e-15 84.7 73 57.5
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 4.3e-15 84.3 74 55.4
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 5.6e-15 84.0 75 56.0
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 5.6e-15 84.0 75 56.0
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 5.6e-15 84.0 75 56.0
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 7.3e-15 83.6 73 60.3
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 2.1e-14 82.0 74 56.8
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 6.2e-14 80.5 73 56.2
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 8.1e-14 80.1 74 54.1
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 1.4e-13 79.3 74 52.7
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-13 79.3 74 52.7
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 2.4e-13 78.6 60 61.7
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 2.0e-12 75.5 73 53.4
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 2.0e-12 75.5 73 53.4
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 5.8e-12 73.9 75 48.0
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 5.8e-12 73.9 73 53.4
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 3.2e-10 68.2 66 54.5
BcaB03g11925 Brassica carinata HOM05D008965 ORTHO05D011533 7.3e-07 57.0 69 42.0
Cpa.g.sc132.46 Carica papaya HOM05D009824 ORTHO05D012089 4.7e-06 54.3 49 46.9


User provided reference genes

Program Settings