Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR049470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.7e-69 263.8 130 100.0
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.1e-37 158.7 98 79.6
CARHR053120 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.3e-32 142.5 90 80.0
AL4G11220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.1e-30 134.0 113 59.3
AL4G11240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.0e-29 131.7 102 65.7
CARHR186290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-28 129.8 104 63.5
Thhalv10000190m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-28 128.3 102 62.7
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 2.9e-27 125.6 103 60.2
Carub.0007s2700 Capsella rubella HOM05D000171 ORTHO05D000101 4.9e-27 124.8 107 63.6
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-24 116.7 105 56.2
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-24 116.7 105 56.2
Carub.0004s0107 Capsella rubella HOM05D000171 ORTHO05D000101 1.7e-24 116.3 102 57.8
CARHR049450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.7e-24 116.3 84 73.8
Carub.0004s0104 Capsella rubella HOM05D000171 ORTHO05D000101 3.9e-24 115.2 102 57.8
Carub.0004s0100 Capsella rubella HOM05D000171 ORTHO05D000101 8.6e-24 114.0 102 56.9
CARHR078280 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.6e-24 114.0 103 61.2
CARHR078290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.6e-23 111.3 102 57.8
Carub.0003s2443 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-18 96.7 107 57.9
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-18 96.3 107 49.5
AL4G11250 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-16 89.7 101 53.5
A08p23970 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-13 80.5 101 40.6
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.4e-13 80.1 102 45.1
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.1e-13 79.0 118 39.8
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 9.0e-13 77.4 53 64.2
A03p08390 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-12 76.6 95 43.2
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 2.6e-12 75.9 53 60.4
AL7G10750 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.6e-12 74.3 101 39.6
A03p08400 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-12 73.9 115 40.9
BraA03t10159Z Brassica rapa HOM05D000171 ORTHO05D000101 9.9e-12 73.9 95 41.1
BraA03t10160Z Brassica rapa HOM05D000171 ORTHO05D000101 9.9e-12 73.9 115 40.9
BcaC07g41051 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-10 70.1 81 48.1
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.2e-10 68.9 95 45.3
CARHR220790 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.1e-10 67.8 105 41.9
C03p09770 Brassica napus HOM05D000171 ORTHO05D000101 6.0e-09 64.7 92 39.1
BolC3t13466H Brassica oleracea HOM05D000171 ORTHO05D000101 6.0e-09 64.7 92 39.1
Thhalv10009644m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.0e-09 64.7 93 39.8
CARHR147800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.8e-09 64.3 69 44.9
AT5G44220 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.1e-08 61.6 104 44.2
Sp6g06960 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.1e-07 60.5 41 70.7


User provided reference genes

Program Settings