Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR049200 Cardamine hirsuta HOM05D001350 ORTHO05D001091 4.5e-123 444.5 211 100.0
CARHR180870 Cardamine hirsuta HOM05D001350 ORTHO05D001091 3.0e-42 176.0 146 54.8
BcaC03g15693 Brassica carinata HOM05D001350 ORTHO05D001091 7.7e-30 134.8 189 36.5
BcaC07g39133 Brassica carinata HOM05D001350 ORTHO05D001091 1.4e-26 124.0 157 37.6
BraA02t08446Z Brassica rapa HOM05D001350 ORTHO05D001091 1.1e-23 114.4 187 36.9
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.0e-23 111.7 196 32.1
C04p20800 Brassica napus HOM05D001350 ORTHO05D001091 3.5e-22 109.4 197 29.9
BolC2t10697H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-22 109.4 176 36.9
BolC4t24823H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-21 107.8 213 31.0
Sp2g06040 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.0e-21 107.8 175 33.7
BcaC08g42980 Brassica carinata HOM05D001350 ORTHO05D001091 2.2e-21 106.7 205 30.2
BcaC07g37777 Brassica carinata HOM05D001350 ORTHO05D001091 1.1e-20 104.4 150 34.7
Thhalv10009844m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 1.1e-20 104.4 186 34.4
BcaC04g23025 Brassica carinata HOM05D001350 ORTHO05D001091 1.5e-20 104.0 150 35.3
Sp5g17980 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.2e-20 102.8 141 36.9
BolC8t47610H Brassica oleracea HOM05D001350 ORTHO05D001091 5.5e-20 102.1 203 29.1
BraA05t19427Z Brassica rapa HOM05D001350 ORTHO05D001091 7.2e-20 101.7 138 37.0
Thhalv10019496m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 7.2e-20 101.7 171 36.8
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-19 100.9 198 30.8
BolC7t43625H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-19 100.9 187 33.2
Sp7g09760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.2e-19 100.9 195 33.3
BolC2t08930H Brassica oleracea HOM05D000048 ORTHO05D000207 2.7e-19 99.8 210 30.5
BcaC03g16655 Brassica carinata HOM05D001350 ORTHO05D001091 8.0e-19 98.2 144 37.5
BcaB01g01759 Brassica carinata HOM05D001350 ORTHO05D001091 1.0e-18 97.8 204 29.9
C05p17500 Brassica napus HOM05D001350 ORTHO05D001091 1.4e-18 97.4 196 30.6
BcaB04g17307 Brassica carinata HOM05D001350 ORTHO05D001091 1.8e-18 97.1 161 33.5
BcaB08g36771 Brassica carinata HOM05D001350 ORTHO05D001091 3.0e-18 96.3 150 36.0
BolC5t33249H Brassica oleracea HOM05D001350 ORTHO05D011193 3.0e-18 96.3 146 33.6
Sp6g09390 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.0e-18 96.3 150 36.0
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 5.2e-18 95.5 198 32.3
BolC3t19138H Brassica oleracea HOM05D001350 ORTHO05D001091 5.2e-18 95.5 206 30.1
BcaC07g42294 Brassica carinata HOM05D001350 ORTHO05D001091 8.8e-18 94.7 145 33.8
AL8G13400 Arabidopsis lyrata HOM05D001368 ORTHO05D001675 1.1e-17 94.4 115 35.7
C01p31730 Brassica napus HOM05D001350 ORTHO05D001091 1.5e-17 94.0 198 32.3
BolC9t57914H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-17 94.0 175 33.7
Sp5g17770 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.0e-17 93.6 154 32.5
BcaB03g16442 Brassica carinata HOM05D001350 ORTHO05D001091 2.6e-17 93.2 150 35.3
BcaC01g05965 Brassica carinata HOM05D001350 ORTHO05D001091 2.6e-17 93.2 200 28.0
BcaC09g49092 Brassica carinata HOM05D001350 ORTHO05D001091 3.3e-17 92.8 152 33.6
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-17 92.4 146 32.9
C02p28310 Brassica napus HOM05D001350 ORTHO05D001091 4.4e-17 92.4 166 31.9
BolC1t03684H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-17 92.4 144 36.8
BcaB02g09955 Brassica carinata HOM05D001350 ORTHO05D001091 5.7e-17 92.0 144 35.4
BcaC01g02077 Brassica carinata HOM05D001350 ORTHO05D001091 7.5e-17 91.7 152 34.2
BolC8t48745H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-17 91.7 205 32.2
C09p50940 Brassica napus HOM05D001350 ORTHO05D001091 9.7e-17 91.3 145 34.5
BolC2t08137H Brassica oleracea HOM05D001350 ORTHO05D001091 9.7e-17 91.3 133 36.8
BolC5t32565H Brassica oleracea HOM05D001350 ORTHO05D001091 9.7e-17 91.3 198 26.8
BcaB05g24532 Brassica carinata HOM05D000003 ORTHO05D001091 1.3e-16 90.9 203 28.1
BolC9t55569H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-16 90.9 197 28.4
BolC7t40853H Brassica oleracea HOM05D001350 ORTHO05D001091 6.3e-16 88.6 140 31.4
BraA09t40337Z Brassica rapa HOM05D001350 ORTHO05D001091 8.2e-16 88.2 118 37.3
Sp7g07530 Schrenkiella parvula HOM05D001350 ORTHO05D001091 8.2e-16 88.2 133 36.8
BraA03t14268Z Brassica rapa HOM05D001350 ORTHO05D001091 1.4e-15 87.4 140 30.0
Sp7g10230 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.4e-15 87.4 126 38.1
Sp7g06400 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-15 87.0 145 34.5
Sp7g10630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-15 87.0 177 31.1
BolC2t09000H Brassica oleracea HOM05D001350 ORTHO05D011193 7.0e-15 85.1 111 34.2
BolC5t33811H Brassica oleracea HOM05D001350 ORTHO05D001091 7.0e-15 85.1 134 35.8
BraA03t13711Z Brassica rapa HOM05D001350 ORTHO05D001091 7.0e-15 85.1 138 35.5
Sp3g23930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.0e-15 85.1 172 30.2
BcaC07g39692 Brassica carinata HOM05D000003 ORTHO05D001091 9.1e-15 84.7 203 30.5
BolC2t09224H Brassica oleracea HOM05D001350 ORTHO05D001091 9.1e-15 84.7 113 37.2
BraA10t43821Z Brassica rapa HOM05D001350 ORTHO05D001091 1.6e-14 84.0 129 34.1
Sp3g29680 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.0e-14 83.6 134 36.6
BolC8t48033H Brassica oleracea HOM05D001350 ORTHO05D001091 4.5e-14 82.4 113 37.2
BraSC37t46148Z Brassica rapa HOM05D001350 ORTHO05D001091 4.5e-14 82.4 105 37.1
Sp7g08450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.5e-14 82.4 142 35.2
SpUn0002_0800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.5e-14 82.4 100 39.0
BolC2t09152H Brassica oleracea HOM05D001350 ORTHO05D001091 7.7e-14 81.6 127 34.6
BolC4t21940H Brassica oleracea HOM05D001350 ORTHO05D001091 7.7e-14 81.6 113 37.2
BcaB08g34689 Brassica carinata HOM05D001350 ORTHO05D001091 1.3e-13 80.9 146 30.1
BolC5t32800H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-13 80.9 120 35.0
BolC5t32144H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-13 80.5 113 36.3
BraA01t02271Z Brassica rapa HOM05D001350 ORTHO05D001091 1.7e-13 80.5 110 39.1
BolC9t56773H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-13 80.1 118 35.6
Sp7g03320 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-13 80.1 132 35.6
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-13 79.7 200 28.5
BolC7t40726H Brassica oleracea HOM05D001350 ORTHO05D001091 2.9e-13 79.7 108 38.0
BraA07t27950Z Brassica rapa HOM05D001350 ORTHO05D001091 2.9e-13 79.7 110 39.1
BcaC03g14873 Brassica carinata HOM05D001350 ORTHO05D001091 3.8e-13 79.3 152 31.6
BolC6t36434H Brassica oleracea HOM05D001350 ORTHO05D001091 3.8e-13 79.3 110 36.4
BraA08t32762Z Brassica rapa HOM05D001350 ORTHO05D001091 3.8e-13 79.3 114 36.8
BolC1t03291H Brassica oleracea HOM05D001350 ORTHO05D001091 5.0e-13 79.0 116 36.2
BolC6t37482H Brassica oleracea HOM05D001350 ORTHO05D001091 5.0e-13 79.0 116 37.1
BraA03t14144Z Brassica rapa HOM05D001350 ORTHO05D001091 6.5e-13 78.6 118 37.3
Sp4g11850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 8.5e-13 78.2 108 36.1
Sp6g07800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-12 77.8 172 29.1
Sp7g05470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-12 77.8 135 32.6
BolC4t23016H Brassica oleracea HOM05D001350 ORTHO05D001091 1.9e-12 77.0 114 36.8
Sp4g09450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.9e-12 77.0 201 31.3
Aa31LG7G10790 Aethionema arabicum HOM05D000003 ORTHO05D001091 2.5e-12 76.6 206 27.2
BolC3t19233H Brassica oleracea HOM05D001350 ORTHO05D001091 2.5e-12 76.6 118 33.9
Sp3g26380 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.5e-12 76.6 106 37.7
Sp7g08950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.2e-12 76.3 101 39.6
BcaC09g48779 Brassica carinata HOM05D001350 ORTHO05D001091 4.2e-12 75.9 124 33.9
BolC3t17244H Brassica oleracea HOM05D001350 ORTHO05D001091 4.2e-12 75.9 113 34.5
Sp3g28720 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.2e-12 75.9 89 39.3
Sp7g05980 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.2e-12 75.9 88 46.6
BcaC09g51820 Brassica carinata HOM05D001350 ORTHO05D001091 5.5e-12 75.5 159 32.1
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-12 75.1 206 24.8
Sp7g10930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.4e-12 74.7 101 41.6
A01p18400 Brassica napus HOM05D001350 ORTHO05D001091 1.2e-11 74.3 119 38.7
Sp4g06470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.6e-11 73.9 91 40.7
Carub.0002s0963 Capsella rubella HOM05D001350 ORTHO05D001091 2.7e-11 73.2 144 30.6
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.6e-11 72.8 212 25.9
BcaB03g16680 Brassica carinata HOM05D001350 ORTHO05D001091 4.7e-11 72.4 161 31.7
A06p35120 Brassica napus HOM05D001350 ORTHO05D001091 4.7e-11 72.4 123 28.5
BraA06t26432Z Brassica rapa HOM05D001350 ORTHO05D001091 4.7e-11 72.4 123 28.5
Sp6g07960 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.7e-11 72.4 109 35.8
BcaC05g29366 Brassica carinata HOM05D001350 ORTHO05D001091 8.0e-11 71.6 149 30.9
A02p34550 Brassica napus HOM05D001350 ORTHO05D001091 8.0e-11 71.6 108 39.8
BolC7t41929H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-10 71.2 110 34.5
BolC9t56667H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-10 71.2 123 34.1
BraA10t43479Z Brassica rapa HOM05D001350 ORTHO05D001091 1.0e-10 71.2 81 39.5
Sp3g24950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.0e-10 71.2 112 33.9
BolC4t27355H Brassica oleracea HOM05D001350 ORTHO05D001091 1.4e-10 70.9 113 31.9
Sp3g31760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-10 70.5 126 36.5
SpUn0030_0070 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-10 70.5 126 36.5
A09p42880 Brassica napus HOM05D001350 ORTHO05D001091 2.3e-10 70.1 107 39.3
Thhalv10027205m.g Eutrema salsugineum HOM05D000757 ORTHO05D001091 2.3e-10 70.1 63 50.8
Sp6g07660 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.3e-10 70.1 92 37.0
BolC4t22998H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-10 69.7 119 36.1
Aa31sc51G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-10 69.3 152 28.9
BraA08t32587Z Brassica rapa HOM05D001350 ORTHO05D001091 5.2e-10 68.9 123 34.1
BcaC01g00384 Brassica carinata HOM05D001350 ORTHO05D001091 8.8e-10 68.2 110 33.6
BolC3t19954H Brassica oleracea HOM05D001350 ORTHO05D001091 8.8e-10 68.2 81 37.0
BraA06t25712Z Brassica rapa HOM05D001350 ORTHO05D001091 1.5e-09 67.4 81 37.0
Sp3g29630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.5e-09 67.4 130 31.5
Sp4g02440 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.5e-09 67.4 111 31.5
BcaC02g09840 Brassica carinata HOM05D001350 ORTHO05D001091 2.0e-09 67.0 194 25.8
BolC2t06976H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-09 67.0 109 36.7
Sp7g07740 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.4e-09 66.2 93 39.8
BcaC07g37262 Brassica carinata HOM05D001350 ORTHO05D001091 4.4e-09 65.9 169 27.2
Carub.0007s3152 Capsella rubella HOM05D001350 ORTHO05D001091 5.7e-09 65.5 90 31.1
BolC3t19762H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-09 65.1 80 36.2
CARHR122740 Cardamine hirsuta HOM05D001350 ORTHO05D001091 9.8e-09 64.7 124 29.0
Sp7g05880 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.8e-09 64.7 109 33.0
Aa31LG1G4180 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-08 63.9 198 26.8
BolC2t07580H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-08 63.5 91 36.3
BolC7t40875H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-08 63.2 81 38.3
BcaB02g10187 Brassica carinata HOM05D001350 ORTHO05D001091 3.7e-08 62.8 122 32.0
BolC2t11867H Brassica oleracea HOM05D001350 ORTHO05D001091 3.7e-08 62.8 140 28.6
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 4.8e-08 62.4 177 25.4
BolC3t21149H Brassica oleracea HOM05D001350 ORTHO05D001091 6.3e-08 62.0 95 30.5
Thhalv10028742m.g Eutrema salsugineum HOM05D007480 ORTHO05D009460 6.3e-08 62.0 91 37.4
BraA01t03311Z Brassica rapa HOM05D001350 ORTHO05D001091 1.1e-07 61.2 113 29.2
Aa31sc1050G10 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.8e-07 60.5 129 24.8
BcaC02g06989 Brassica carinata HOM05D001239 ORTHO05D000925 1.8e-07 60.5 177 28.2
Aa31sc320G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-07 60.1 140 27.9
BolC7t45382H Brassica oleracea HOM05D001350 ORTHO05D001091 2.4e-07 60.1 78 37.2
Aa31LG6G6890 Aethionema arabicum HOM05D000003 ORTHO05D001091 3.1e-07 59.7 138 26.8
Thhalv10023166m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.1e-07 59.7 74 37.8
BolC8t47822H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-07 59.3 77 40.3
BolC8t48699H Brassica oleracea HOM05D001264 ORTHO05D001167 5.4e-07 58.9 69 40.6
BolC5t32669H Brassica oleracea HOM05D001350 ORTHO05D028344 7.0e-07 58.5 89 30.3
BolC5t33349H Brassica oleracea HOM05D001350 ORTHO05D001091 9.1e-07 58.2 141 28.4
Sp1g32350 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.1e-07 58.2 111 27.9
Sp6g10060 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.1e-07 58.2 118 28.8
BcaC06g34616 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-06 57.4 130 30.0
Sp1g31030 Schrenkiella parvula HOM05D001350 ORTHO05D011193 1.6e-06 57.4 89 33.7
BolC1t04094H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-06 56.2 88 35.2
BraA08t32108Z Brassica rapa HOM05D001350 ORTHO05D001091 3.5e-06 56.2 92 28.3
C07p05540 Brassica napus HOM05D001350 ORTHO05D001091 5.9e-06 55.5 63 38.1
Aa31sc180G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-06 55.1 147 25.9
Sp2g01850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.7e-06 55.1 83 36.1


User provided reference genes

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