Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR047240 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.3e-29 130.6 63 100.0
AT3G20690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.9e-11 70.1 64 54.7
AL3G34620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-10 67.0 50 68.0
Carub.0003s1995 Capsella rubella HOM05D000209 ORTHO05D000129 7.7e-10 66.6 70 51.4
CARHR149830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.3e-09 65.9 71 49.3
AT3G20700 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.9e-09 64.7 63 50.8
AT3G20710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.5e-09 63.2 50 64.0
Carub.0003s2963 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-08 62.4 61 54.1
Thhalv10023095m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.5e-08 61.6 69 53.6
Thhalv10000550m.g Eutrema salsugineum HOM05D000209 ORTHO05D020214 3.2e-08 61.2 56 55.4
BraA05t22190Z Brassica rapa HOM05D000209 ORTHO05D000129 4.2e-08 60.8 67 44.8
AL3G33690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-08 60.5 71 46.5
AL275U10020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.2e-08 60.1 71 46.5
Thhalv10000467m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.2e-08 60.1 50 62.0
CARHR096520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.2e-07 59.3 68 51.5
Thhalv10001171m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.2e-07 59.3 69 46.4
AL3G34610 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-07 58.9 64 54.7
AT5G60560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-07 58.9 72 48.6
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-07 58.9 71 46.5
AL1G54030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-07 58.5 60 53.3
BcaC06g34070 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-07 58.5 52 55.8
A05p33650 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-07 58.5 66 45.5
BolC3t16425H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-07 58.5 69 47.8
Carub.0001s3046 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-07 58.5 68 45.6
CARHR047290 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-07 58.5 66 54.5
AL1G53830 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.2 73 50.7
AL3G30730 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.2 71 49.3
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.2 72 51.4
AL3G53160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.2 69 49.3
C05p50670 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-07 58.2 67 41.8
Carub.0006s2303 Capsella rubella HOM05D000209 ORTHO05D000129 2.7e-07 58.2 70 48.6
CARHR088590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-07 58.2 54 55.6
AL3G34600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-07 57.8 56 53.6
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-07 57.8 70 50.0
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-07 57.8 72 48.6
BcaC01g03174 Brassica carinata HOM05D000209 ORTHO05D000129 4.6e-07 57.4 72 48.6
A06p43770 Brassica napus HOM05D000209 ORTHO05D000129 4.6e-07 57.4 61 49.2
BolC3t17813H Brassica oleracea HOM05D000209 ORTHO05D000129 4.6e-07 57.4 72 48.6
BolC3t17814H Brassica oleracea HOM05D000209 ORTHO05D000129 4.6e-07 57.4 72 48.6
AL3G29670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.1e-07 57.0 69 44.9
AL3G53140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.1e-07 57.0 69 47.8
AL8G23220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.1e-07 57.0 54 53.7
BolC5t33815H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-07 57.0 67 41.8
BraA03t12579Z Brassica rapa HOM05D000209 ORTHO05D000129 6.1e-07 57.0 69 46.4
AL5G27570 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.9e-07 56.6 68 47.1
AL6G52510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.9e-07 56.6 66 48.5
AT2G18780 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.9e-07 56.6 69 46.4
AT3G16820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.9e-07 56.6 57 54.4
AT4G05080 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.9e-07 56.6 66 48.5
BcaC05g28936 Brassica carinata HOM05D011362 ORTHO05D000129 7.9e-07 56.6 67 43.3
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 7.9e-07 56.6 60 48.3
CARHR158530 Cardamine hirsuta HOM05D000209 ORTHO05D014056 7.9e-07 56.6 59 49.2
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.0e-06 56.2 57 54.4
AL8G25210 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.0e-06 56.2 53 52.8
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.0e-06 56.2 53 56.6
BcaC06g34076 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-06 56.2 61 47.5
C03p50600 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-06 56.2 59 47.5
C07p33050 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-06 56.2 61 47.5
BolC3t17349H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-06 56.2 59 47.5
BolC7t43812H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-06 56.2 61 47.5
BcaB06g25675 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 55.8 55 50.9
BcaB08g36912 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 55.8 74 48.6
BcaC06g31389 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 55.8 71 46.5
BolC5t33813H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 55.8 65 44.6
AT3G16880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-06 55.5 65 52.3
A02p31300 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-06 55.5 71 46.5
BraA02t08134Z Brassica rapa HOM05D000209 ORTHO05D000129 1.8e-06 55.5 71 46.5
AT3G14030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.3e-06 55.1 61 49.2
BcaC01g03778 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-06 55.1 71 43.7
A03p41890 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-06 55.1 59 47.5
BraA03t13343Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-06 55.1 59 47.5
Carub.0003s1977 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-06 55.1 71 45.1
Carub.0003s3197 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-06 55.1 70 45.7
Carub.0008s1027 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-06 55.1 58 48.3
Thhalv10022091m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.3e-06 55.1 49 57.1
AL3G30470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-06 54.7 75 46.7
AL3G34630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-06 54.7 66 54.5
AT3G18120 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-06 54.7 71 46.5
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-06 54.7 72 47.2
A05p29240 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-06 54.7 67 44.8
BraA05t21809Z Brassica rapa HOM05D000209 ORTHO05D000129 3.0e-06 54.7 67 44.8
CARHR092160 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-06 54.7 72 45.8
CARHR214390 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-06 54.7 68 41.2
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.9e-06 54.3 64 48.4
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.9e-06 54.3 64 48.4
BcaC01g03771 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-06 54.3 71 43.7
Carub.0003s2067 Capsella rubella HOM05D000209 ORTHO05D000129 3.9e-06 54.3 64 53.1
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.9e-06 54.3 57 49.1
C01p43530 Brassica napus HOM05D000209 ORTHO05D000129 5.1e-06 53.9 49 57.1
BolC1t04314H Brassica oleracea HOM05D000209 ORTHO05D000129 5.1e-06 53.9 49 57.1
Carub.0003s2322 Capsella rubella HOM05D000209 ORTHO05D000129 5.1e-06 53.9 52 57.7
CARHR092000 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.1e-06 53.9 72 40.3
CARHR096160 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.1e-06 53.9 76 44.7
Thhalv10015430m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.1e-06 53.9 75 48.0
Thhalv10021928m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.1e-06 53.9 72 44.4
AL8G24290 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-06 53.5 58 48.3
AT3G19470 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.7e-06 53.5 72 45.8
BcaC02g08719 Brassica carinata HOM05D000209 ORTHO05D000129 6.7e-06 53.5 47 61.7
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 6.7e-06 53.5 59 45.8
BolC3t17419H Brassica oleracea HOM05D000209 ORTHO05D000129 6.7e-06 53.5 44 59.1
BolC3t20418H Brassica oleracea HOM05D000209 ORTHO05D014056 6.7e-06 53.5 70 42.9
BolC4t26727H Brassica oleracea HOM05D000209 ORTHO05D000129 6.7e-06 53.5 47 61.7
Carub.0002s1194 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-06 53.5 59 45.8
Carub.0004s0576 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-06 53.5 66 45.5
CARHR100830 Cardamine hirsuta HOM05D000209 ORTHO05D014439 6.7e-06 53.5 67 49.3
Thhalv10022064m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.7e-06 53.5 51 51.0
Thhalv10022067m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.7e-06 53.5 70 44.3
Sp3g14050 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.7e-06 53.5 68 45.6
AL1G46220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.8e-06 53.1 70 45.7
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.8e-06 53.1 70 44.3
AT3G16740 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.8e-06 53.1 69 43.5
AT5G36200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.8e-06 53.1 66 48.5
BolC3t17150H Brassica oleracea HOM05D000209 ORTHO05D000129 8.8e-06 53.1 71 43.7
CARHR095010 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.8e-06 53.1 52 53.8
Thhalv10020932m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.8e-06 53.1 65 46.2


User provided reference genes

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