Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR045780 Cardamine hirsuta HOM05D014824 ORTHO05D002245 6.4e-34 146.7 69 100.0
AL1G64310 Arabidopsis lyrata HOM05D014824 ORTHO05D002245 3.8e-26 120.9 72 80.6
BcaB07g33174 Brassica carinata HOM05D014824 ORTHO05D002245 1.6e-21 105.5 70 77.1
Carub.0001s4465 Capsella rubella HOM05D014824 ORTHO05D002245 2.4e-20 101.7 72 75.0
BcaC08g43673 Brassica carinata HOM05D014824 ORTHO05D002245 3.1e-20 101.3 70 74.3
BraSC56t46388Z Brassica rapa HOM05D014824 ORTHO05D002245 3.1e-20 101.3 70 74.3
C06p10930 Brassica napus HOM05D014824 ORTHO05D002245 4.4e-19 97.4 61 77.0
Thhalv10011923m.g Eutrema salsugineum HOM05D014824 ORTHO05D002245 6.4e-18 93.6 68 75.0
AT1G56060 Arabidopsis thaliana HOM05D014824 ORTHO05D002245 1.1e-14 82.8 56 73.2
THA.LOC104815717 Tarenaya hassleriana HOM05D014824 ORTHO05D002245 3.1e-12 74.7 88 51.1
Aa31LG10G180 Aethionema arabicum HOM05D012834 ORTHO05D012142 4.9e-10 67.4 65 55.4
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 1.4e-09 65.9 65 53.8
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 3.2e-09 64.7 67 53.7
Sed0023256 Sechium edule HOM05D002385 ORTHO05D002245 4.2e-09 64.3 77 51.9
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 1.2e-08 62.8 76 47.4
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.6e-08 62.4 76 50.0
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.6e-08 62.4 57 59.6
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 3.5e-08 61.2 57 59.6
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 4.6e-08 60.8 57 59.6
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 4.6e-08 60.8 57 59.6
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 4.6e-08 60.8 57 59.6
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 4.6e-08 60.8 57 59.6
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 6.0e-08 60.5 77 48.1
AL4G27570 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 7.9e-08 60.1 75 53.3
Carub.0001s0465 Capsella rubella HOM05D002385 ORTHO05D002245 7.9e-08 60.1 71 49.3
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 7.9e-08 60.1 76 50.0
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 1.3e-07 59.3 57 56.1
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 1.8e-07 58.9 57 57.9
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 1.8e-07 58.9 57 57.9
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 3.0e-07 58.2 56 58.9
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 3.0e-07 58.2 56 58.9
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 3.9e-07 57.8 62 54.8
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 5.1e-07 57.4 57 56.1
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 5.1e-07 57.4 73 45.2
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 8.7e-07 56.6 73 45.2
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 8.7e-07 56.6 57 56.1
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 1.9e-06 55.5 73 45.2
CARHR004830 Cardamine hirsuta HOM05D002385 ORTHO05D002245 3.3e-06 54.7 71 45.1
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 4.3e-06 54.3 83 43.4
Manes.11G006500 Manihot esculenta HOM05D002385 ORTHO05D002245 4.3e-06 54.3 63 49.2
Lalb_Chr20g0108741 Lupinus albus HOM05D002385 ORTHO05D002245 5.6e-06 53.9 58 51.7
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 5.6e-06 53.9 55 52.7
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 7.4e-06 53.5 57 50.9
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 9.6e-06 53.1 78 44.9


User provided reference genes

Program Settings