Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 2.1e-217 758.8 402 100.0
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 4.2e-178 628.2 413 84.7
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 5.5e-170 601.3 409 82.6
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 8.2e-166 587.4 418 78.0
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.4e-165 586.6 413 79.7
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.4e-165 586.6 413 79.9
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 9.8e-151 537.3 416 73.8
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 8.6e-147 524.2 413 72.9
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 8.6e-147 524.2 413 72.9
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.1e-146 523.9 422 71.1
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 3.7e-142 508.8 409 72.1
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 8.9e-136 487.6 423 67.8
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 6.2e-105 385.2 432 54.9
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 4.1e-80 302.8 436 45.9
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 4.2e-77 292.7 414 46.1
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.9e-76 288.5 428 44.9
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 6.7e-75 285.4 425 45.2
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 2.5e-74 283.5 426 43.7
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 5.7e-74 282.3 450 42.7
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 5.7e-74 282.3 468 41.0
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 7.4e-74 282.0 425 44.5
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.6e-73 280.8 400 44.0
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 4.8e-73 279.3 409 45.0
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 6.3e-73 278.9 461 41.6
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 1.8e-72 277.3 403 43.9
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 6.9e-72 275.4 425 43.8
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.0e-71 273.9 451 41.5
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 7.7e-71 271.9 455 42.9
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 2.9e-70 270.0 400 45.5
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 8.5e-70 268.5 415 43.4
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 2.5e-69 266.9 422 42.4
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 3.6e-68 263.1 415 42.4
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 2.3e-67 260.4 443 41.1
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 2.3e-67 260.4 438 41.6
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 5.1e-67 259.2 421 42.5
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 2.6e-66 256.9 434 42.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.6e-66 256.9 412 42.2
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 2.6e-66 256.9 432 41.9
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 9.7e-66 255.0 417 41.7
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 1.3e-65 254.6 418 41.9
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 1.1e-64 251.5 447 40.3
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 1.1e-64 251.5 418 39.5
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 2.4e-64 250.4 444 39.6
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 3.4e-63 246.5 284 50.7
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.0e-62 245.0 405 41.7
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.3e-62 244.6 405 41.7
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 3.8e-62 243.0 422 40.3
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 1.9e-61 240.7 401 38.9
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.9e-61 240.7 405 41.2
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 3.2e-61 240.0 424 39.4
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 9.4e-61 238.4 408 41.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.6e-60 237.7 400 42.0
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.1e-60 237.3 443 38.6
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 2.7e-60 236.9 316 47.2
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 3.6e-60 236.5 404 39.6
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.0e-59 235.0 427 38.2
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.4e-59 234.6 403 41.4
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 5.2e-59 232.6 418 39.7
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 2.0e-58 230.7 418 38.5
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 2.0e-58 230.7 429 39.9
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 9.7e-58 228.4 441 35.8
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.7e-57 227.6 427 37.0
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.2e-57 227.3 437 38.7
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 2.8e-57 226.9 328 44.5
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.8e-57 226.9 428 40.0
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 6.3e-57 225.7 429 38.0
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 8.2e-57 225.3 280 48.6
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 5.3e-56 222.6 255 50.6
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 9.1e-56 221.9 422 37.4
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 1.2e-55 221.5 297 45.1
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 3.5e-55 219.9 447 35.8
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 3.5e-55 219.9 240 51.7
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.0e-54 218.4 341 42.8
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.2e-54 217.2 270 47.4
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.2e-54 217.2 400 40.2
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 2.2e-54 217.2 263 47.5
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.9e-54 216.9 266 47.0
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 2.1e-52 210.7 260 48.5
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.7e-52 210.3 405 38.0
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 2.3e-51 207.2 405 38.0
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 6.7e-51 205.7 410 38.8
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.6e-50 203.8 399 37.8
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 4.8e-49 199.5 312 40.4
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 2.4e-48 197.2 315 40.0
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 3.1e-48 196.8 396 37.1
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 5.9e-47 192.6 422 35.3
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 9.4e-45 185.3 146 65.1
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 8.0e-44 182.2 332 39.8
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 3.0e-43 180.3 265 41.5
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.2e-41 174.1 278 39.2
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.5e-37 161.4 347 35.2
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.4e-35 154.8 347 34.3
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.0e-34 151.0 329 34.7
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 2.6e-34 150.6 169 57.4
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 2.2e-33 147.5 240 37.1
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.8e-30 136.7 271 32.8
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 4.3e-29 133.3 244 33.6
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.8e-28 130.6 325 34.8
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.6e-13 79.7 78 51.3
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 9.9e-10 68.9 66 47.0
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 8.3e-09 65.9 261 27.6
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 8.3e-09 65.9 74 52.7
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 6.0e-07 59.7 67 46.3


User provided reference genes

Program Settings