Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR045390 Cardamine hirsuta HOM05D010079 ORTHO05D011550 2.2e-34 148.3 69 100.0
BcaNung03153 Brassica carinata HOM05D010079 ORTHO05D011550 2.7e-24 114.8 66 75.8
AL5G45170 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 7.3e-22 106.7 67 74.6
AL5G45150 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 2.8e-21 104.8 68 72.1
Carub.0005s2910 Capsella rubella HOM05D010079 ORTHO05D011550 1.8e-20 102.1 67 71.6
AT3G62380 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 5.4e-17 90.5 57 71.9
C04p30670 Brassica napus HOM05D010079 ORTHO05D011550 3.0e-15 84.7 57 64.9
Thhalv10009972m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 5.1e-15 84.0 61 62.3
AL2G23450 Arabidopsis lyrata HOM05D026666 ORTHO05D026802 6.6e-15 83.6 67 53.7
Sp7g12250 Schrenkiella parvula HOM05D010079 ORTHO05D011550 1.5e-14 82.4 61 62.3
Sp1g33930 Schrenkiella parvula HOM05D010079 ORTHO05D011550 8.1e-13 76.6 65 56.9
SpUn0058_0010 Schrenkiella parvula HOM05D010079 ORTHO05D011550 8.1e-13 76.6 65 56.9
Thhalv10009802m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 1.3e-10 69.3 66 48.5
AL2G29740 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.1e-09 66.2 57 52.6
CARHR172720 Cardamine hirsuta HOM05D010079 ORTHO05D011550 5.4e-09 63.9 31 87.1
BraA09t40629Z Brassica rapa HOM05D010079 ORTHO05D011550 9.3e-09 63.2 58 48.3
AL2G30500 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.2e-08 62.8 59 50.8
AT3G62350 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 3.5e-08 61.2 67 49.3
AT1G71320 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 1.3e-07 59.3 59 49.2
CARHR172670 Cardamine hirsuta HOM05D001738 ORTHO05D011550 1.5e-06 55.8 58 44.8
AL5G45090 Arabidopsis lyrata HOM05D001738 ORTHO05D011550 1.9e-06 55.5 32 71.9
Carub.0002s1775 Capsella rubella HOM05D010079 ORTHO05D011550 2.5e-06 55.1 58 44.8
Carub.0002s1777 Capsella rubella HOM05D010079 ORTHO05D011550 4.3e-06 54.3 59 47.5


User provided reference genes

Program Settings