Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 3.2e-151 538.5 290 100.0
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.2e-97 360.5 304 74.3
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 2.3e-93 346.3 303 72.9
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 8.8e-93 344.4 303 73.9
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.9e-80 302.8 296 67.9
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.4e-77 293.9 296 67.6
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 7.5e-76 288.1 295 65.4
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 7.5e-76 288.1 295 65.4
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 7.5e-76 288.1 295 65.4
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 2.2e-72 276.6 296 65.2
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 1.2e-70 270.8 296 64.2
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 2.7e-65 253.1 297 61.6
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 2.2e-43 180.3 297 49.8
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 7.8e-33 145.2 275 42.5
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 7.3e-31 138.7 265 42.3
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 3.8e-27 126.3 273 40.7
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 3.2e-26 123.2 269 43.9
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.1e-23 114.8 276 39.9
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.5e-23 113.6 265 38.9
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 3.3e-23 113.2 266 38.3
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 5.6e-23 112.5 276 39.9
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 5.2e-21 105.9 255 38.0
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 2.0e-20 104.0 267 39.3
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 2.0e-20 104.0 258 39.9
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 1.9e-18 97.4 271 35.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.2e-12 78.2 262 32.4
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 3.4e-12 76.6 94 58.5
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 5.8e-12 75.9 263 31.2
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 1.3e-11 74.7 284 30.6
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 1.7e-11 74.3 308 32.1
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 8.4e-11 72.0 262 32.1
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 7.9e-09 65.5 271 28.8
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.0e-08 65.1 268 34.3
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 1.0e-08 65.1 284 30.6
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 1.0e-08 65.1 261 31.0
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.3e-08 64.7 258 29.1
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 3.0e-08 63.5 277 28.9
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 3.9e-08 63.2 256 29.7
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 6.7e-08 62.4 277 28.9
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 8.7e-08 62.0 256 31.2
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 1.1e-07 61.6 279 33.7
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.5e-07 61.2 280 28.9
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.5e-07 61.2 280 28.9
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.5e-07 60.5 279 28.7
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 4.3e-07 59.7 266 30.5
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 9.6e-07 58.5 261 26.1
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 3.7e-06 56.6 66 51.5
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 3.7e-06 56.6 82 47.6


User provided reference genes

Program Settings