Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 5.1e-179 630.9 314 100.0
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.2e-145 519.2 299 86.3
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.1e-144 516.9 298 86.2
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 1.1e-144 516.9 299 88.0
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 1.0e-142 510.4 299 86.6
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 2.1e-140 502.7 293 87.0
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 4.3e-138 495.0 299 84.9
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 3.7e-137 491.9 299 83.3
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 6.9e-136 487.6 299 83.6
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 7.7e-135 484.2 298 82.9
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 7.7e-135 484.2 298 82.9
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 7.7e-135 484.2 298 82.9
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.3e-134 483.4 296 82.8
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 4.4e-122 441.8 287 76.3
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 4.0e-99 365.5 240 72.1
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 1.5e-98 363.6 228 73.7
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 1.5e-98 363.6 252 69.4
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 2.6e-98 362.8 235 72.8
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 5.7e-98 361.7 275 65.8
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.3e-97 360.5 279 64.9
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 2.2e-97 359.8 274 65.3
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 2.2e-97 359.8 243 71.2
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 1.4e-96 357.1 246 69.9
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 5.4e-96 355.1 243 70.4
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 7.0e-96 354.8 245 68.2
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 9.2e-96 354.4 231 70.6
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.6e-95 353.6 248 68.5
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 2.0e-95 353.2 239 69.5
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 2.7e-95 352.8 243 69.5
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 5.9e-95 351.7 244 68.4
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 5.9e-95 351.7 240 70.4
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.7e-94 350.1 221 72.9
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.7e-94 350.1 231 70.6
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.3e-94 349.7 252 67.5
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 3.0e-94 349.4 243 68.7
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 8.6e-94 347.8 258 64.7
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.1e-93 347.4 270 63.0
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.1e-93 347.4 225 72.0
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.5e-93 347.1 238 68.5
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.9e-93 346.7 242 68.2
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 2.5e-93 346.3 237 70.5
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.3e-93 345.9 221 72.4
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 3.3e-93 345.9 253 68.0
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 5.6e-93 345.1 225 71.1
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 7.3e-93 344.7 225 71.1
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 9.5e-93 344.4 271 62.0
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 1.2e-92 344.0 235 69.8
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.6e-92 343.6 227 73.6
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.6e-92 343.6 225 70.7
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 2.1e-92 343.2 276 61.6
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 2.1e-92 343.2 227 68.7
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.6e-92 342.4 237 67.9
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 4.7e-92 342.0 236 68.2
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 8.0e-92 341.3 225 70.2
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 3.1e-91 339.3 219 70.8
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 3.1e-91 339.3 257 64.2
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 4.0e-91 339.0 228 71.1
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 5.2e-91 338.6 243 67.5
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 5.2e-91 338.6 245 66.5
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 6.8e-91 338.2 225 71.1
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 6.8e-91 338.2 243 66.3
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 6.8e-91 338.2 243 65.8
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 8.9e-91 337.8 218 72.0
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.0e-90 336.7 249 64.7
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 2.6e-90 336.3 247 65.2
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 3.4e-90 335.9 256 62.9
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 3.4e-90 335.9 216 71.8
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 4.4e-90 335.5 237 67.9
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 1.3e-89 334.0 250 64.0
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.9e-89 332.8 249 64.3
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 6.4e-89 331.6 250 64.8
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 6.4e-89 331.6 247 64.4
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.9e-88 330.1 222 68.5
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 9.2e-88 327.8 227 66.1
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 6.0e-87 325.1 231 64.5
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 3.0e-86 322.8 275 59.3
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 3.9e-86 322.4 217 68.2
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 1.5e-85 320.5 216 68.5
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 2.5e-85 319.7 261 59.8
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 4.3e-85 318.9 229 65.5
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 4.7e-84 315.5 225 68.0
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 8.1e-84 314.7 253 62.1
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 6.8e-83 311.6 259 61.0
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 5.4e-80 302.0 193 74.1
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 3.5e-79 299.3 298 53.0
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 3.9e-78 295.8 216 63.0
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 7.3e-77 291.6 257 59.1
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 1.8e-75 287.0 189 72.5
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 2.3e-75 286.6 174 76.4
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 5.2e-75 285.4 175 76.6
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 1.3e-73 280.8 192 70.3
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 2.2e-73 280.0 188 71.3
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 6.4e-73 278.5 218 58.3
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 8.4e-73 278.1 174 75.3
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.6e-71 273.9 186 69.4
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 3.5e-71 272.7 233 58.4
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.7e-70 270.4 187 68.4
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 3.9e-70 269.2 183 68.9
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.1e-69 267.7 190 66.8
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 5.2e-67 258.8 204 62.7
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 1.9e-61 240.4 170 70.6
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 6.9e-51 205.3 221 44.3
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 1.2e-50 204.5 233 42.9
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.6e-47 194.1 165 58.2
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.7e-47 193.4 231 43.3
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.1e-46 189.1 113 77.0
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.5e-45 187.6 113 76.1
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 7.4e-45 185.3 143 59.4
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.7e-44 183.0 224 45.1
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 9.0e-43 178.3 123 67.5
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.4e-42 176.4 220 45.0
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 3.0e-38 163.3 116 69.0
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.2e-34 151.4 149 53.0
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 2.6e-34 150.2 97 69.1
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 2.6e-34 150.2 97 69.1
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.8e-27 127.5 106 54.7
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 4.1e-27 126.3 131 54.2
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 4.1e-27 126.3 131 54.2
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 2.0e-26 124.0 106 56.6
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 4.3e-21 106.3 152 43.4
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 2.8e-20 103.6 76 60.5
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.9e-18 95.9 75 61.3
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.7e-14 82.4 56 67.9
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 1.3e-12 78.2 132 37.9
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 3.7e-12 76.6 123 39.0
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 1.8e-11 74.3 105 42.9
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.1e-11 73.6 50 68.0
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.6e-10 71.2 118 38.1
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 3.2e-08 63.5 96 38.5
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 2.1e-07 60.8 48 58.3


User provided reference genes

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