Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR038530 Cardamine hirsuta HOM05D003941 ORTHO05D116063 4.8e-66 254.2 116 100.0
CARHR056610 Cardamine hirsuta HOM05D003941 ORTHO05D009447 8.2e-42 173.7 90 88.9
AL2G19840 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.5e-30 135.6 90 67.8
AT1G65110 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.0e-28 128.6 90 64.4
Carub.0002s1060 Capsella rubella HOM05D003941 ORTHO05D009447 1.5e-27 126.3 89 65.2
AT1G65120 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 5.7e-27 124.4 89 65.2
CARHR038560 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.8e-26 122.1 89 65.2
CARHR056630 Cardamine hirsuta HOM05D003941 ORTHO05D009447 3.7e-26 121.7 89 64.0
AL2G19870 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 8.2e-26 120.6 89 60.7
AL2G19970 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 7.7e-24 114.0 90 56.7
Carub.0002s1057 Capsella rubella HOM05D003941 ORTHO05D009447 1.0e-23 113.6 90 57.8
Thhalv10019959m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 3.8e-23 111.7 89 59.6
Sp3g03240 Schrenkiella parvula HOM05D003941 ORTHO05D009447 2.5e-22 109.0 89 60.7
AT1G65130 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.2e-22 108.6 90 54.4
SpUn0054_0050 Schrenkiella parvula HOM05D003941 ORTHO05D009447 2.1e-21 105.9 92 55.4
AL2G20130 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 8.0e-21 104.0 89 53.9
CARHR056640 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.4e-20 103.2 89 52.8
Carub.0008s2263 Capsella rubella HOM05D003941 ORTHO05D009447 6.8e-20 100.9 79 62.0
Thhalv10005669m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 8.8e-20 100.5 80 60.0
Thhalv10005598m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 1.2e-19 100.1 89 53.9
Sp2g25130 Schrenkiella parvula HOM05D003941 ORTHO05D009447 1.2e-19 100.1 88 53.4
AL4G22760 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.0e-19 99.4 89 52.8
AL8G38710 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.0e-19 99.4 89 53.9
Carub.0008s2264 Capsella rubella HOM05D003941 ORTHO05D009447 2.0e-19 99.4 90 55.6
Carub.0002s1066 Capsella rubella HOM05D003941 ORTHO05D009447 3.4e-19 98.6 89 51.7
AL8G38700 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 7.5e-19 97.4 89 52.8
Thhalv10005405m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 1.7e-18 96.3 79 58.2
Carub.0001s4142 Capsella rubella HOM05D003941 ORTHO05D009447 2.2e-18 95.9 89 51.7
Carub.0008s2262 Capsella rubella HOM05D003941 ORTHO05D009447 2.2e-18 95.9 89 49.4
CARHR275720 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.2e-18 95.9 89 49.4
CARHR275730 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.8e-18 95.5 89 50.6
AT2G27630 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 6.3e-18 94.4 89 51.7
Carub.0002s1065 Capsella rubella HOM05D003941 ORTHO05D009447 8.3e-18 94.0 89 49.4
AL2G20180 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 5.3e-17 91.3 89 49.4
AT5G61940 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 5.3e-17 91.3 89 48.3
BcaB05g24093 Brassica carinata HOM05D003941 ORTHO05D009447 2.0e-16 89.4 90 50.0
Carub.0004s0831 Capsella rubella HOM05D003941 ORTHO05D009447 2.0e-16 89.4 89 50.6
CARHR120250 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.0e-16 89.4 89 49.4
AT5G51530 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.7e-16 89.0 89 49.4
AT1G52450 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 4.5e-16 88.2 90 47.8
AT1G65200 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 7.7e-16 87.4 89 47.2
AT5G61950 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.7e-15 86.3 89 47.2
Carub.0002s1061 Capsella rubella HOM05D003941 ORTHO05D009447 2.9e-15 85.5 92 47.8
BcaC03g14681 Brassica carinata HOM05D003941 ORTHO05D009447 6.5e-15 84.3 90 48.9
BcaC05g30233 Brassica carinata HOM05D003941 ORTHO05D009447 6.5e-15 84.3 91 49.5
C02p21210 Brassica napus HOM05D003941 ORTHO05D009447 6.5e-15 84.3 90 48.9
BolC2t08261H Brassica oleracea HOM05D003941 ORTHO05D009447 6.5e-15 84.3 90 48.9
CARHR275710 Cardamine hirsuta HOM05D003941 ORTHO05D009447 6.5e-15 84.3 90 47.8
AT1G52430 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 8.5e-15 84.0 78 53.8
A02p13090 Brassica napus HOM05D003941 ORTHO05D009447 1.5e-14 83.2 90 45.6
BraA02t06365Z Brassica rapa HOM05D003941 ORTHO05D009447 1.5e-14 83.2 90 45.6
CARHR056680 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.9e-14 82.8 72 51.4
Aa31LG2G2310 Aethionema arabicum HOM05D003941 ORTHO05D009447 2.5e-14 82.4 89 40.4
BcaC05g29948 Brassica carinata HOM05D003941 ORTHO05D009447 3.2e-14 82.0 91 50.5
BolC5t34939H Brassica oleracea HOM05D003941 ORTHO05D009447 3.2e-14 82.0 91 50.5
BcaC03g14683 Brassica carinata HOM05D003941 ORTHO05D009447 4.2e-14 81.6 90 44.4
BolC2t08263H Brassica oleracea HOM05D003941 ORTHO05D009447 4.2e-14 81.6 90 44.4
CARHR056760 Cardamine hirsuta HOM05D003941 ORTHO05D009447 4.2e-14 81.6 83 44.6
C05p62840 Brassica napus HOM05D003941 ORTHO05D009447 7.2e-14 80.9 91 50.5
BcaB05g24095 Brassica carinata HOM05D003941 ORTHO05D009447 9.4e-14 80.5 90 44.4
Aa31LG2G2340 Aethionema arabicum HOM05D003941 ORTHO05D009447 1.2e-13 80.1 88 43.2
BolC2t12229H Brassica oleracea HOM05D003941 ORTHO05D009447 1.2e-13 80.1 85 48.2
BraA02t09120Z Brassica rapa HOM05D003941 ORTHO05D009447 1.6e-13 79.7 68 55.9
BcaC05g30201 Brassica carinata HOM05D003941 ORTHO05D009447 2.1e-13 79.3 91 47.3
BcaC05g30202 Brassica carinata HOM05D003941 ORTHO05D009447 2.1e-13 79.3 91 47.3
BraA05t23053Z Brassica rapa HOM05D003941 ORTHO05D009447 2.7e-13 79.0 90 50.0
A05p43100 Brassica napus HOM05D003941 ORTHO05D009447 4.7e-13 78.2 90 50.0
BcaC03g18108 Brassica carinata HOM05D003941 ORTHO05D009447 6.1e-13 77.8 83 48.2
A02p13070 Brassica napus HOM05D003941 ORTHO05D009447 8.0e-13 77.4 90 46.7
C02p21230 Brassica napus HOM05D003941 ORTHO05D009447 1.0e-12 77.0 90 43.3
AT2G27650 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.4e-12 76.6 89 44.9
A05p43090 Brassica napus HOM05D003941 ORTHO05D009447 3.0e-12 75.5 91 48.4
Carub.0004s0829 Capsella rubella HOM05D003941 ORTHO05D009447 3.0e-12 75.5 83 48.2
A02p41830 Brassica napus HOM05D003941 ORTHO05D009447 5.2e-12 74.7 68 52.9
C02p61760 Brassica napus HOM05D003941 ORTHO05D009447 5.2e-12 74.7 68 52.9
BraA02t06363Z Brassica rapa HOM05D003941 ORTHO05D009447 1.5e-11 73.2 90 44.4
CARHR120240 Cardamine hirsuta HOM05D003941 ORTHO05D009447 5.7e-11 71.2 93 39.8
A02p41820 Brassica napus HOM05D003941 ORTHO05D009447 6.3e-10 67.8 83 45.8
BcaC03g18102 Brassica carinata HOM05D003941 ORTHO05D009447 1.4e-09 66.6 90 42.2
THA.LOC104821865 Tarenaya hassleriana HOM05D003941 ORTHO05D009447 1.4e-09 66.6 99 37.4
A02p41750 Brassica napus HOM05D003941 ORTHO05D009447 3.1e-09 65.5 90 41.1
C02p61670 Brassica napus HOM05D003941 ORTHO05D009447 4.1e-09 65.1 90 41.1
BolC2t12225H Brassica oleracea HOM05D003941 ORTHO05D009447 4.1e-09 65.1 90 41.1
BraA02t09115Z Brassica rapa HOM05D003941 ORTHO05D009447 7.0e-09 64.3 81 40.7
BcaNung07176 Brassica carinata HOM05D003941 ORTHO05D009447 9.1e-09 63.9 83 42.2
THA.LOC104805708 Tarenaya hassleriana HOM05D003941 ORTHO05D002286 7.7e-08 60.8 89 33.7
BcaC03g18107 Brassica carinata HOM05D003941 ORTHO05D009447 1.7e-07 59.7 83 42.2
THA.LOC104821900 Tarenaya hassleriana HOM05D003941 ORTHO05D012174 1.5e-06 56.6 57 50.9


User provided reference genes

Program Settings