Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR037650 Cardamine hirsuta HOM05D004531 ORTHO05D005484 1.6e-33 145.6 76 100.0
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 2.4e-18 95.1 53 90.6
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 9.5e-15 83.2 53 79.2
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 2.1e-14 82.0 53 79.2
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 2.1e-14 82.0 53 79.2
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.8e-14 81.6 53 79.2
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.8e-14 81.6 53 79.2
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 1.1e-13 79.7 53 73.6
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 1.4e-13 79.3 53 75.5
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 1.4e-13 79.3 53 75.5
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 1.4e-13 79.3 53 75.5
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 1.8e-13 79.0 53 75.5
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 2.4e-13 78.6 53 73.6
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 2.4e-13 78.6 53 73.6
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 5.2e-13 77.4 53 71.7
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 5.2e-13 77.4 53 71.7
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 5.2e-13 77.4 53 71.7
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 1.2e-12 76.3 53 71.7
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.2e-06 56.2 54 51.9
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 8.1e-06 53.5 55 49.1


User provided reference genes

Program Settings