Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR037130 Cardamine hirsuta HOM05D000930 ORTHO05D000748 7.0e-40 166.8 81 100.0
Carub.0001s2839 Capsella rubella HOM05D000930 ORTHO05D000748 2.0e-15 85.5 47 87.2
AL1G44070 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 8.6e-14 80.1 51 76.5
Thhalv10007993m.g Eutrema salsugineum HOM05D000930 ORTHO05D000748 8.6e-14 80.1 53 71.7
AT1G30170 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 1.1e-13 79.7 51 74.5
C05p29010 Brassica napus HOM05D000930 ORTHO05D000748 1.9e-13 79.0 74 55.4
BcaC05g27042 Brassica carinata HOM05D000930 ORTHO05D000748 3.3e-13 78.2 51 70.6
BolC5t31628H Brassica oleracea HOM05D000930 ORTHO05D000748 3.3e-13 78.2 51 70.6
A08p24670 Brassica napus HOM05D000930 ORTHO05D000748 7.3e-13 77.0 47 76.6
C03p76430 Brassica napus HOM05D000930 ORTHO05D000748 7.3e-13 77.0 47 76.6
BraA08t34422Z Brassica rapa HOM05D000930 ORTHO05D000748 7.3e-13 77.0 47 76.6
AL1G15390 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 1.4e-08 62.8 44 59.1
Carub.0001s0486 Capsella rubella HOM05D000930 ORTHO05D000748 1.9e-08 62.4 44 59.1
AT1G05540 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 4.1e-08 61.2 45 51.1
BcaC05g24367 Brassica carinata HOM05D000930 ORTHO05D000748 4.1e-08 61.2 54 50.0
C05p03910 Brassica napus HOM05D000930 ORTHO05D000748 4.1e-08 61.2 54 50.0
BolC5t29165H Brassica oleracea HOM05D000930 ORTHO05D000748 4.1e-08 61.2 54 50.0
AT1G05550 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 5.4e-08 60.8 45 53.3
BcaC05g24370 Brassica carinata HOM05D000930 ORTHO05D000748 5.4e-08 60.8 82 42.7
A10p04260 Brassica napus HOM05D000930 ORTHO05D000748 7.1e-08 60.5 48 52.1
BraA10t42693Z Brassica rapa HOM05D000930 ORTHO05D000748 7.1e-08 60.5 48 52.1
BcaB03g13900 Brassica carinata HOM05D000930 ORTHO05D000748 1.6e-07 59.3 47 51.1
BcaC07g36828 Brassica carinata HOM05D000930 ORTHO05D000748 2.1e-07 58.9 43 55.8
A08p36390 Brassica napus HOM05D000930 ORTHO05D000748 2.1e-07 58.9 43 55.8
C08p01970 Brassica napus HOM05D000930 ORTHO05D000748 2.1e-07 58.9 43 55.8
BolC8t46995H Brassica oleracea HOM05D000930 ORTHO05D000748 2.1e-07 58.9 43 55.8
BraA08t35543Z Brassica rapa HOM05D000930 ORTHO05D000748 2.1e-07 58.9 43 55.8
Thhalv10009589m.g Eutrema salsugineum HOM05D000930 ORTHO05D000748 2.1e-07 58.9 44 54.5
CARHR028490 Cardamine hirsuta HOM05D000930 ORTHO05D000748 2.7e-07 58.5 46 54.3
BcaB03g13447 Brassica carinata HOM05D000930 ORTHO05D000748 3.5e-07 58.2 43 53.5
BcaC05g24374 Brassica carinata HOM05D000930 ORTHO05D000748 4.6e-07 57.8 61 41.0
BcaC05g24375 Brassica carinata HOM05D000930 ORTHO05D000748 4.6e-07 57.8 48 50.0
C05p03880 Brassica napus HOM05D000930 ORTHO05D000748 4.6e-07 57.8 48 50.0
C05p03890 Brassica napus HOM05D000930 ORTHO05D000748 4.6e-07 57.8 77 36.4
AL1G15400 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 6.0e-07 57.4 45 48.9
BcaB03g13445 Brassica carinata HOM05D000930 ORTHO05D000748 7.8e-07 57.0 44 54.5
BcaC05g24369 Brassica carinata HOM05D000930 ORTHO05D000748 7.8e-07 57.0 45 48.9
BcaC05g24372 Brassica carinata HOM05D000930 ORTHO05D000748 7.8e-07 57.0 45 48.9
BcaC07g36827 Brassica carinata HOM05D000930 ORTHO05D000748 1.0e-06 56.6 44 54.5
C08p01960 Brassica napus HOM05D000930 ORTHO05D000748 1.0e-06 56.6 44 54.5
BolC8t46994H Brassica oleracea HOM05D000930 ORTHO05D000748 1.0e-06 56.6 44 54.5
Thhalv10009821m.g Eutrema salsugineum HOM05D000930 ORTHO05D000748 1.7e-06 55.8 53 45.3
BraA10t42694Z Brassica rapa HOM05D000930 ORTHO05D000748 2.3e-06 55.5 45 46.7
BcaB03g13448 Brassica carinata HOM05D000930 ORTHO05D000748 3.0e-06 55.1 44 52.3
BraA08t35544Z Brassica rapa HOM05D000930 ORTHO05D000748 3.0e-06 55.1 44 52.3
BcaC07g36826 Brassica carinata HOM05D000930 ORTHO05D000748 6.6e-06 53.9 51 45.1
A08p36410 Brassica napus HOM05D000930 ORTHO05D000748 6.6e-06 53.9 44 52.3
C08p01950 Brassica napus HOM05D000930 ORTHO05D000748 6.6e-06 53.9 51 45.1
BolC8t46993H Brassica oleracea HOM05D000930 ORTHO05D000748 6.6e-06 53.9 51 45.1


User provided reference genes

Program Settings