Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR036300 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.5e-39 164.9 77 100.0
AT4G09660 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.6e-17 92.4 78 57.7
THA.LOC104825349 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 5.1e-16 87.4 70 57.1
BolC2t08734H Brassica oleracea HOM05D000254 ORTHO05D000165 1.6e-14 82.4 108 43.5
AT3G29450 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.8e-13 79.0 80 50.0
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.4e-13 78.6 113 40.7
Thhalv10027556m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.4e-13 78.6 113 40.7
Thhalv10028186m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.4e-13 78.6 113 40.7
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.1e-13 78.2 107 40.2
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.1e-13 77.8 98 43.9
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.1e-13 77.8 109 40.4
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.1e-13 77.8 109 40.4
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-12 75.5 88 42.0
CSS0045922 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.6e-12 75.1 110 37.3
CARHR055060 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.6e-12 75.1 113 39.8
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.5e-12 74.3 78 46.2
AT3G31402 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 5.9e-12 73.9 67 52.2
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.7e-12 73.6 83 45.8
CARHR180580 Cardamine hirsuta HOM05D000254 ORTHO05D000165 7.7e-12 73.6 109 41.3
AT2G06541 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 2.2e-11 72.0 113 38.1
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 2.9e-11 71.6 114 37.7
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 2.9e-11 71.6 109 35.8
Ciclev10023755m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.8e-11 71.2 83 44.6
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 5.0e-11 70.9 94 39.4
THA.LOC104799914 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 6.5e-11 70.5 109 38.5
CSS0007203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.5e-11 70.1 107 37.4
Ciclev10003344m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.5e-11 70.1 77 42.9
Thhalv10001868m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 8.5e-11 70.1 81 45.7
CANSAT01G2760 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-10 69.7 109 37.6
THA.LOC104817106 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 1.1e-10 69.7 106 39.6
TWI31G0240 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.9e-10 68.9 115 35.7
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.2e-10 67.8 106 34.9
PSO339G4772 Papaver somniferum HOM05D000254 ORTHO05D000165 4.2e-10 67.8 109 35.8
FvH4_7g16871 Fragaria vesca HOM05D000254 ORTHO05D000165 7.2e-10 67.0 106 34.9
PSO782G1155 Papaver somniferum HOM05D000254 ORTHO05D000165 7.2e-10 67.0 109 34.9
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-09 66.2 109 33.9
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.2e-09 66.2 103 37.9
AT1G42710 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.6e-09 65.9 99 37.4
Thhalv10005675m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.1e-09 65.5 101 34.7
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.1e-09 65.5 109 37.6
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 3.6e-09 64.7 109 34.9
Aqoxy1G03125 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 4.6e-09 64.3 113 34.5
CANSAT78G1301 Cannabis sativa HOM05D000254 ORTHO05D000165 4.6e-09 64.3 109 35.8
Thhalv10002330m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.6e-09 64.3 98 35.7
AL3G40330 Arabidopsis lyrata HOM05D000254 ORTHO05D000165 6.1e-09 63.9 43 69.8
Ciclev10010399m.g Citrus clementina HOM05D000254 ORTHO05D000165 7.9e-09 63.5 86 39.5
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 7.9e-09 63.5 93 36.6
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 7.9e-09 63.5 93 36.6
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 1.0e-08 63.2 65 46.2
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.4e-08 62.8 83 42.2
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.4e-08 62.8 109 33.9
FvH4_3g23261 Fragaria vesca HOM05D000254 ORTHO05D000165 1.4e-08 62.8 106 34.0
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 1.4e-08 62.8 77 42.9
Thhalv10023173m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.8e-08 62.4 113 32.7
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.8e-08 62.4 113 34.5
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 2.3e-08 62.0 93 35.5
BolC4t24868H Brassica oleracea HOM05D000254 ORTHO05D000165 3.0e-08 61.6 104 37.5
Thhalv10012204m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.0e-08 61.6 109 34.9
Lj3g0003777 Lotus japonicus HOM05D000254 ORTHO05D000165 3.0e-08 61.6 79 40.5
Thhalv10011948m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.9e-08 61.2 79 43.0
Thhalv10023932m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.9e-08 61.2 107 34.6
Oeu029385.1 Olea europaea HOM05D000254 ORTHO05D000165 3.9e-08 61.2 111 33.3
PSO724G0323 Papaver somniferum HOM05D000254 ORTHO05D000165 3.9e-08 61.2 79 39.2
Ciclev10000580m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.1e-08 60.8 89 40.4
Ciclev10030070m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.1e-08 60.8 92 40.2
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 5.1e-08 60.8 107 29.9
Gorai.002G197900 Gossypium raimondii HOM05D000254 ORTHO05D000165 6.7e-08 60.5 84 41.7
Hund01117 Selenicereus undatus HOM05D000254 ORTHO05D000165 6.7e-08 60.5 113 33.6
Hund22828 Selenicereus undatus HOM05D000254 ORTHO05D000165 6.7e-08 60.5 113 33.6
AT1G41920 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 8.8e-08 60.1 47 61.7
Glyma.16G122000 Glycine max HOM05D000254 ORTHO05D000165 8.8e-08 60.1 106 35.8
CARHR286110 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.1e-07 59.7 43 65.1
FvH4_3g33391 Fragaria vesca HOM05D000254 ORTHO05D000165 1.1e-07 59.7 103 33.0
AT3G29763 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.5e-07 59.3 47 57.4
Lj3g0000312 Lotus japonicus HOM05D000254 ORTHO05D000165 1.5e-07 59.3 75 41.3
Ciclev10006709m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.0e-07 58.9 103 32.0
Ciclev10013469m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.0e-07 58.9 43 67.4
CARHR261170 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.6e-07 58.5 43 60.5
Lj3g0023878 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-07 58.5 79 36.7
PSO170G0893 Papaver somniferum HOM05D000254 ORTHO05D000165 2.6e-07 58.5 107 34.6
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 2.6e-07 58.5 113 31.9
PSO266G0029 Papaver somniferum HOM05D000254 ORTHO05D000165 3.3e-07 58.2 105 35.2
Hund19195 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.3e-07 58.2 113 32.7
Hund22477 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.3e-07 58.2 113 32.7
TWI15G1142 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.3e-07 58.2 108 35.2
arahy.Tifrunner.gnm1.ann1.82PA6C Arachis hypogaea HOM05D000254 ORTHO05D008475 4.4e-07 57.8 106 33.0
arahy.Tifrunner.gnm1.ann1.M2LGX7 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.4e-07 57.8 106 33.0
CANSAT78G0474 Cannabis sativa HOM05D000254 ORTHO05D000165 4.4e-07 57.8 66 45.5
CANSAT56G2195 Cannabis sativa HOM05D000254 ORTHO05D000165 5.7e-07 57.4 102 34.3
Glyma.18G136400 Glycine max HOM05D000254 ORTHO05D000165 5.7e-07 57.4 85 34.1
PSO144G0153 Papaver somniferum HOM05D000254 ORTHO05D000165 5.7e-07 57.4 109 32.1
arahy.Tifrunner.gnm1.ann1.NQI5N4 Arachis hypogaea HOM05D000254 ORTHO05D000165 9.7e-07 56.6 98 36.7
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.7e-07 56.6 43 60.5
arahy.Tifrunner.gnm1.ann1.B9TG8T Arachis hypogaea HOM05D000254 ORTHO05D000165 1.3e-06 56.2 106 32.1
arahy.Tifrunner.gnm1.ann1.NAGQ02 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.3e-06 56.2 105 33.3
Thhalv10011093m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.3e-06 56.2 43 58.1
Thhalv10019469m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.3e-06 56.2 107 33.6
TPR.G11089 Trifolium pratense HOM05D000254 ORTHO05D000165 1.3e-06 56.2 110 30.9
Ah.00g000220 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.7e-06 55.8 114 31.6
Ah.11g042400 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.7e-06 55.8 114 31.6
arahy.Tifrunner.gnm1.ann1.HQEQ0E Arachis hypogaea HOM05D000254 ORTHO05D009797 1.7e-06 55.8 95 37.9
arahy.Tifrunner.gnm1.ann1.XB47SY Arachis hypogaea HOM05D000254 ORTHO05D000165 1.7e-06 55.8 78 38.5
CARHR292670 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.7e-06 55.8 43 58.1
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.7e-06 55.8 90 38.9
Ciclev10030154m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.7e-06 55.8 73 42.5
arahy.Tifrunner.gnm1.ann1.59FNBU Arachis hypogaea HOM05D000254 ORTHO05D000165 2.2e-06 55.5 89 33.7
arahy.Tifrunner.gnm1.ann1.A30LRN Arachis hypogaea HOM05D000254 ORTHO05D000165 2.2e-06 55.5 107 32.7
Ciclev10024402m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.2e-06 55.5 66 43.9
Ciclev10033576m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.2e-06 55.5 43 60.5
Ciclev10033602m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.2e-06 55.5 102 37.3
arahy.Tifrunner.gnm1.ann1.651TP1 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.8e-06 55.1 96 36.5
arahy.Tifrunner.gnm1.ann1.8PT1JD Arachis hypogaea HOM05D000254 ORTHO05D000165 2.8e-06 55.1 106 32.1
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.8e-06 55.1 40 65.0
Thhalv10015352m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.8e-06 55.1 74 39.2
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 2.8e-06 55.1 101 34.7
PSO135G0412 Papaver somniferum HOM05D000254 ORTHO05D000165 2.8e-06 55.1 43 58.1
SGA_v2.0_scaffold38G15060 Striga asiatica HOM05D000254 ORTHO05D000165 2.8e-06 55.1 47 53.2
arahy.Tifrunner.gnm1.ann1.1M4KFL Arachis hypogaea HOM05D000254 ORTHO05D000165 3.7e-06 54.7 106 32.1
arahy.Tifrunner.gnm1.ann1.FDGJ35 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.7e-06 54.7 105 33.3
arahy.Tifrunner.gnm1.ann1.KI4Z9H Arachis hypogaea HOM05D000254 ORTHO05D000165 3.7e-06 54.7 98 36.7
MD12G1128200 Malus domestica HOM05D000254 ORTHO05D000165 3.7e-06 54.7 44 56.8
Oeu007107.1 Olea europaea HOM05D000254 ORTHO05D000165 3.7e-06 54.7 106 33.0
Ah.08g211160 Amaranthus hybridus HOM05D000254 ORTHO05D000165 4.8e-06 54.3 114 30.7
arahy.Tifrunner.gnm1.ann1.0CX4QV Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.1D0S3C Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.1ITW6E Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.37EJMB Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.5V22GC Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.6C6AUX Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.B9ME0N Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.EZBA4V Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.GBRU05 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.GF2Q34 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.HB9UQF Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.IW0F64 Arachis hypogaea HOM05D001481 ORTHO05D001865 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.JW8DV3 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.KUK7QJ Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.MKQ0V7 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.N9GFF0 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.NJ0CXJ Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.S64W8T Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 105 32.4
arahy.Tifrunner.gnm1.ann1.STQ7V2 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.T3UZZN Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.TK28MW Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.VAS4QW Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.X7IJKV Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.XG3H5T Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.8e-06 54.3 98 35.7
Ciclev10003808m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.8e-06 54.3 43 55.8
SGA_v2.0_scaffold219G42580 Striga asiatica HOM05D000254 ORTHO05D000165 4.8e-06 54.3 47 53.2
arahy.Tifrunner.gnm1.ann1.C5EP31 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.3e-06 53.9 98 35.7
arahy.Tifrunner.gnm1.ann1.L0KN3H Arachis hypogaea HOM05D000254 ORTHO05D000165 6.3e-06 53.9 98 35.7
arahy.Tifrunner.gnm1.ann1.LZ27L8 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.3e-06 53.9 98 35.7
arahy.Tifrunner.gnm1.ann1.YL584E Arachis hypogaea HOM05D000254 ORTHO05D000165 6.3e-06 53.9 98 34.7
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.3e-06 53.9 47 55.3
Thhalv10023867m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.3e-06 53.9 47 51.1
Thhalv10029343m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.3e-06 53.9 77 35.1
Aqoxy2G02304 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 8.2e-06 53.5 107 31.8
arahy.Tifrunner.gnm1.ann1.73CAJP Arachis hypogaea HOM05D000254 ORTHO05D000165 8.2e-06 53.5 98 35.7
CiPaw.12G009800 Carya illinoinensis HOM05D000254 ORTHO05D000165 8.2e-06 53.5 91 35.2
Ciclev10023860m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.2e-06 53.5 119 32.8
Ciclev10030720m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.2e-06 53.5 102 36.3
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 8.2e-06 53.5 84 38.1
Oeu014787.1 Olea europaea HOM05D000254 ORTHO05D000165 8.2e-06 53.5 106 33.0
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 8.2e-06 53.5 106 32.1


User provided reference genes

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