Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR035870 Cardamine hirsuta HOM05D009395 ORTHO05D011539 5.5e-88 328.6 318 100.0
Carub.0001s3513 Capsella rubella HOM05D009395 ORTHO05D011539 5.7e-45 185.7 354 71.2
Sp1g33470 Schrenkiella parvula HOM05D009395 ORTHO05D011539 3.1e-43 179.9 317 63.7
AT1G44191 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 5.9e-42 175.6 367 67.0
C08p07340 Brassica napus HOM05D009395 ORTHO05D011539 1.7e-41 174.1 320 66.2
BolC8t47575H Brassica oleracea HOM05D009395 ORTHO05D011539 1.7e-41 174.1 320 66.2
BraA08t32646Z Brassica rapa HOM05D009395 ORTHO05D011539 7.2e-40 168.7 325 67.4
AL1G52230 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 3.0e-38 163.3 370 67.0
Thhalv10011611m.g Eutrema salsugineum HOM05D009395 ORTHO05D011539 9.1e-35 151.8 365 59.2
BcaC07g37300 Brassica carinata HOM05D009395 ORTHO05D011539 1.2e-34 151.4 299 66.2
BcaB04g17589 Brassica carinata HOM05D009395 ORTHO05D011539 1.7e-28 131.0 306 61.4
AL5G30730 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 5.9e-26 122.5 328 54.3
Sp5g11630 Schrenkiella parvula HOM05D009395 ORTHO05D011539 2.3e-25 120.6 328 52.4
AT3G50580 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 3.6e-23 113.2 325 47.1
BcaC06g33090 Brassica carinata HOM05D009395 ORTHO05D011539 2.6e-21 107.1 72 58.3
Carub.0005s1690 Capsella rubella HOM05D009395 ORTHO05D011539 1.7e-20 104.4 325 46.2
CARHR160090 Cardamine hirsuta HOM05D009395 ORTHO05D011539 4.9e-20 102.8 320 43.4
BcaC06g33305 Brassica carinata HOM05D009395 ORTHO05D011539 1.1e-19 101.7 72 55.6
A03p47820 Brassica napus HOM05D009395 ORTHO05D011539 1.1e-19 101.7 72 55.6
C07p45790 Brassica napus HOM05D009395 ORTHO05D011539 1.1e-19 101.7 72 55.6
BolC7t45101H Brassica oleracea HOM05D009395 ORTHO05D011539 1.1e-19 101.7 72 55.6
BraA03t13892Z Brassica rapa HOM05D009395 ORTHO05D011539 1.1e-19 101.7 72 55.6
BcaC09g50038 Brassica carinata HOM05D009395 ORTHO05D011539 5.4e-19 99.4 71 57.7
A01p24020 Brassica napus HOM05D009395 ORTHO05D011539 5.4e-19 99.4 71 57.7
C01p29700 Brassica napus HOM05D009395 ORTHO05D011539 5.4e-19 99.4 71 57.7
BolC1t02911H Brassica oleracea HOM05D009395 ORTHO05D011539 5.4e-19 99.4 71 57.7
BcaB05g23225 Brassica carinata HOM05D009395 ORTHO05D011539 2.7e-18 97.1 324 55.2
BraA01t02312Z Brassica rapa HOM05D009395 ORTHO05D011539 2.7e-18 97.1 71 56.3
Aa31LG7G15090 Aethionema arabicum HOM05D009395 ORTHO05D011539 6.6e-17 92.4 75 54.7
Aa31LG4G18750 Aethionema arabicum HOM05D009395 ORTHO05D011539 1.1e-11 75.1 55 60.0
THA.LOC104806832 Tarenaya hassleriana HOM05D009395 ORTHO05D011539 2.3e-09 67.4 67 38.8


User provided reference genes

Program Settings