Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR033520 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-53 211.5 112 100.0
CARHR033430 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.1e-46 188.3 105 93.3
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-22 108.6 109 56.0
BraA03t10652Z Brassica rapa HOM05D000051 ORTHO05D000015 3.1e-22 108.6 109 56.0
Thhalv10013763m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.0e-22 107.5 106 57.5
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-22 107.1 109 56.0
BcaB01g04399 Brassica carinata HOM05D000051 ORTHO05D000015 7.7e-21 104.0 109 53.2
Thhalv10015747m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.8e-20 101.7 103 57.3
Carub.0008s1683 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-18 95.5 106 49.1
Carub.0008s1682 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-17 93.6 106 50.0
CARHR269900 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.0e-17 92.0 108 48.1
Sp6g18220 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.0e-16 89.4 109 51.4
C09p47870 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-16 88.6 103 48.5
Carub.0008s1666 Capsella rubella HOM05D000051 ORTHO05D000015 4.4e-16 88.2 103 51.5
BcaB01g02570 Brassica carinata HOM05D000051 ORTHO05D000015 5.7e-16 87.8 107 49.5
Carub.0008s1665 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-15 86.7 102 50.0
BolC2t07647H Brassica oleracea HOM05D000051 ORTHO05D000015 1.7e-15 86.3 113 46.0
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-15 85.9 113 45.1
BraA02t05982Z Brassica rapa HOM05D000051 ORTHO05D000015 2.2e-15 85.9 113 45.1
BolC3t14007H Brassica oleracea HOM05D000051 ORTHO05D000015 6.3e-15 84.3 109 49.5
CARHR269740 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.2e-15 84.0 105 47.6
Thhalv10015540m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-14 83.2 104 48.1
Carub.0008s1681 Capsella rubella HOM05D000051 ORTHO05D000015 2.4e-14 82.4 111 45.9
A03p12960 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-14 81.6 109 46.8
BraA03t10604Z Brassica rapa HOM05D000051 ORTHO05D000015 4.1e-14 81.6 109 46.8
BcaB01g02571 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-13 79.7 109 49.5
Thhalv10028119m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.5e-13 78.6 104 46.2
BcaC01g06424 Brassica carinata HOM05D000051 ORTHO05D000015 4.5e-13 78.2 109 47.7
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-13 78.2 109 45.0
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 4.5e-13 78.2 109 45.0
C02p15290 Brassica napus HOM05D000051 ORTHO05D000015 5.9e-13 77.8 106 46.2
BolC2t07646H Brassica oleracea HOM05D000051 ORTHO05D000015 5.9e-13 77.8 106 46.2
Carub.0001s3275 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-12 77.0 108 45.4
CARHR269930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.0e-12 77.0 105 46.7
Carub.0001s3443 Capsella rubella HOM05D000051 ORTHO05D000015 2.9e-12 75.5 98 48.0
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-12 75.5 111 45.9
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 3.8e-12 75.1 109 44.0
C03p15850 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-12 74.7 106 46.2
BolC3t14016H Brassica oleracea HOM05D000051 ORTHO05D000015 5.0e-12 74.7 106 46.2
BraA02t05981Z Brassica rapa HOM05D000051 ORTHO05D000015 5.0e-12 74.7 106 45.3
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.1e-11 73.6 102 43.1
A02p09150 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-11 73.2 106 46.2
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-11 73.2 106 43.4
AT1G32375 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.5e-11 72.4 104 49.0
C03p15840 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-11 72.4 106 45.3
BolC3t14015H Brassica oleracea HOM05D000051 ORTHO05D000015 2.5e-11 72.4 106 45.3
C09p47830 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-11 72.0 111 47.7
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 3.2e-11 72.0 104 48.1
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-11 72.0 104 43.3
BcaB05g22267 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-11 71.2 110 40.9
A03p13550 Brassica napus HOM05D000051 ORTHO05D000015 7.2e-11 70.9 106 42.5
BraA03t10660Z Brassica rapa HOM05D000051 ORTHO05D000015 7.2e-11 70.9 106 42.5
AT5G50270 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.4e-11 70.5 108 43.5
BcaC03g14224 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-10 69.7 110 40.9
C02p15270 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-10 69.7 110 40.9
BolC9t57621H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-10 69.7 111 46.8
A03p13460 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-10 69.3 75 54.7
C03p15830 Brassica napus HOM05D000051 ORTHO05D000038 3.6e-10 68.6 106 44.3
CARHR031780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.7e-10 68.2 108 43.5
Thhalv10013652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.7e-10 68.2 110 40.0
C03p15700 Brassica napus HOM05D000051 ORTHO05D000015 6.1e-10 67.8 105 40.0
BolC3t14004H Brassica oleracea HOM05D000051 ORTHO05D000015 6.1e-10 67.8 105 40.0
CARHR269920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.1e-10 67.8 111 41.4
AT4G26340 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.0e-10 67.4 103 43.7
AT5G56420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.0e-10 67.4 110 39.1
A02p09110 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-10 67.4 110 40.0
BolC2t07644H Brassica oleracea HOM05D000051 ORTHO05D000015 8.0e-10 67.4 110 40.0
BraA02t05979Z Brassica rapa HOM05D000051 ORTHO05D000015 8.0e-10 67.4 110 40.0
Aa31LG3G5180 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.0e-09 67.0 104 40.4
CARHR031760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.0e-09 67.0 109 42.2
Sp1g29700 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.0e-09 67.0 95 44.2
Carub.0008s1667 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-09 65.9 111 41.4
BcaB05g22262 Brassica carinata HOM05D000051 ORTHO05D000015 5.2e-09 64.7 110 40.9
BraA03t10650Z Brassica rapa HOM05D000051 ORTHO05D000015 5.2e-09 64.7 108 41.7
AL8G32120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-09 64.3 111 43.2
Carub.0008s1684 Capsella rubella HOM05D000051 ORTHO05D000015 6.8e-09 64.3 112 41.1
CARHR269990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.8e-09 64.3 107 40.2
CARHR269840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-08 63.5 108 39.8
AL3G22240 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.5e-08 63.2 100 38.0
AL8G32140 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-08 63.2 110 36.4
A03p13540 Brassica napus HOM05D000051 ORTHO05D000038 1.5e-08 63.2 106 41.5
Aa31LG3G5160 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.0e-08 62.8 104 40.4
Thhalv10027384m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.0e-08 62.8 104 40.4
A03p13440 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-08 62.4 108 40.7
Carub.0008s1685 Capsella rubella HOM05D000051 ORTHO05D000015 2.6e-08 62.4 108 35.2
CARHR036560 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-08 62.0 105 41.9
Thhalv10015734m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-08 62.0 101 39.6
Sp6g18210 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.4e-08 62.0 108 42.6
BraA03t10649Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-08 61.6 110 36.4
BraA10t43468Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-08 61.6 81 46.9
AL6G35130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.8e-08 60.5 104 36.5
BcaC01g06425 Brassica carinata HOM05D000051 ORTHO05D000015 9.8e-08 60.5 108 38.9
A02p09100 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-08 60.5 98 37.8
BraA02t05978Z Brassica rapa HOM05D000051 ORTHO05D000015 9.8e-08 60.5 98 37.8
BraA03t10659Z Brassica rapa HOM05D000051 ORTHO05D000038 9.8e-08 60.5 107 42.1
Carub.0008s1675 Capsella rubella HOM05D000051 ORTHO05D000015 9.8e-08 60.5 110 41.8
Carub.0008s1677 Capsella rubella HOM05D000051 ORTHO05D000015 9.8e-08 60.5 108 40.7
Carub.0008s1689 Capsella rubella HOM05D000051 ORTHO05D000015 9.8e-08 60.5 107 35.5
CARHR269760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.8e-08 60.5 112 40.2
Thhalv10013618m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-08 60.5 102 37.3
Aa31LG3G12320 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.3e-07 60.1 104 36.5
AL1G65610 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-07 60.1 102 42.2
AL7G26600 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-07 60.1 103 40.8
AL3G22250 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-07 59.7 96 39.6
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-07 59.7 105 35.2
Carub.0007s1460 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-07 59.7 103 39.8
Thhalv10015962m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-07 59.7 108 40.7
Carub.0008s0939 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-07 59.3 105 37.1
Sp6g18240 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.2e-07 59.3 105 37.1
BolC3t14005H Brassica oleracea HOM05D000051 ORTHO05D000015 2.8e-07 58.9 107 36.4
C07p19700 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-07 58.5 100 39.0
BolC7t42486H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-07 58.5 100 39.0
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.7e-07 58.5 102 37.3
AT5G56390 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.8e-07 58.2 115 43.5
BolC5t30949H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-07 58.2 96 38.5
BolC7t46369H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-07 58.2 99 42.4
Carub.0001s3276 Capsella rubella HOM05D000051 ORTHO05D000015 4.8e-07 58.2 68 55.9
Thhalv10015729m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.8e-07 58.2 109 38.5
BcaC06g31631 Brassica carinata HOM05D000051 ORTHO05D000015 6.3e-07 57.8 99 38.4
BcaNung03592 Brassica carinata HOM05D000051 ORTHO05D000015 8.3e-07 57.4 99 42.4
C03p15720 Brassica napus HOM05D000051 ORTHO05D000015 8.3e-07 57.4 107 35.5
Carub.0005s1791 Capsella rubella HOM05D000051 ORTHO05D000015 8.3e-07 57.4 109 40.4
Thhalv10009690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.3e-07 57.4 106 40.6
AT1G55030 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.1e-06 57.0 102 42.2
BcaC04g20097 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-06 57.0 70 48.6
A09p41460 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 57.0 96 38.5
BolC9t57625H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-06 57.0 70 48.6
AL8G32070 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.4e-06 56.6 108 37.0
BcaC09g50692 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-06 56.6 103 37.9
C01p22190 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 56.6 103 37.9
C03p15760 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 56.6 99 43.4
C05p22510 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 56.6 96 37.5
C08p12680 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 56.6 109 36.7
BolC1t02149H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-06 56.6 103 37.9
BolC8t48903H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-06 56.6 109 36.7
Thhalv10015273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-06 56.6 107 41.1
Sp6g18235 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.4e-06 56.6 104 38.5
Aa31LG3G3750 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.8e-06 56.2 100 37.0
BcaC06g34571 Brassica carinata HOM05D000051 ORTHO05D000015 1.8e-06 56.2 99 37.4
A03p13410 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 56.2 100 36.0
A08p34630 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 56.2 109 36.7
C07p27010 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 56.2 99 37.4
C07p54830 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 56.2 94 39.4
BolC7t43232H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-06 56.2 99 37.4
CARHR269860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-06 56.2 108 38.0
CARHR270040 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-06 56.2 109 37.6
Thhalv10029164m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-06 56.2 108 34.3
AL6G36280 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.4e-06 55.8 104 35.6
BcaC03g14222 Brassica carinata HOM05D000051 ORTHO05D000015 2.4e-06 55.8 91 38.5
A03p13480 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-06 55.8 105 40.0
C07p35990 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-06 55.8 98 38.8
BolC2t07640H Brassica oleracea HOM05D000051 ORTHO05D000015 2.4e-06 55.8 91 38.5
BraA03t10647Z Brassica rapa HOM05D000051 ORTHO05D000015 2.4e-06 55.8 100 36.0
AT5G44850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-06 55.5 100 43.0
A03p61410 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 55.5 99 41.4
C02p15340 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 55.5 109 37.6
BolC2t07650H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-06 55.5 109 37.6
CARHR139730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.1e-06 55.5 100 35.0
C02p15240 Brassica napus HOM05D000051 ORTHO05D000015 5.4e-06 54.7 86 39.5
BolC7t44116H Brassica oleracea HOM05D000051 ORTHO05D000015 5.4e-06 54.7 98 37.8
BraA10t43079Z Brassica rapa HOM05D000051 ORTHO05D000015 5.4e-06 54.7 100 36.0
Thhalv10029383m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.4e-06 54.7 104 39.4
BcaC01g06427 Brassica carinata HOM05D000051 ORTHO05D000015 7.0e-06 54.3 100 35.0
BcaC06g33876 Brassica carinata HOM05D000051 ORTHO05D000015 7.0e-06 54.3 98 37.8
A02p08930 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 100 36.0
A08p34660 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 103 37.9
A09p47860 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 103 35.9
A09p48450 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 105 35.2
C08p12660 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 109 35.8
BraA08t35374Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-06 54.3 103 37.9
BraA08t35378Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-06 54.3 103 37.9
BraA09t40297Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-06 54.3 105 35.2
CARHR265450 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.0e-06 54.3 107 34.6
AL8G32310 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.1e-06 53.9 100 35.0
AL8G32650 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.1e-06 53.9 100 34.0
BraA02t05962Z Brassica rapa HOM05D000051 ORTHO05D000015 9.1e-06 53.9 100 36.0
Carub.0008s1256 Capsella rubella HOM05D000051 ORTHO05D000015 9.1e-06 53.9 109 33.9
CARHR031790 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.1e-06 53.9 95 42.1
Thhalv10027798m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-06 53.9 105 37.1
Thhalv10028299m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-06 53.9 108 36.1


User provided reference genes

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