Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR033500 Cardamine hirsuta HOM05D000937 ORTHO05D115916 7.0e-26 119.8 58 100.0
CARHR033450 Cardamine hirsuta HOM05D000937 ORTHO05D000787 8.9e-21 102.8 58 84.5
CARHR033440 Cardamine hirsuta HOM05D000937 ORTHO05D000787 1.5e-20 102.1 58 84.5
CARHR033510 Cardamine hirsuta HOM05D000937 ORTHO05D000787 4.9e-19 97.1 58 81.0
AT1G34040 Arabidopsis thaliana HOM05D000937 ORTHO05D000787 1.2e-17 92.4 58 79.3
AL1G48480 Arabidopsis lyrata HOM05D000937 ORTHO05D000787 2.0e-17 91.7 58 75.9
Thhalv10007588m.g Eutrema salsugineum HOM05D000937 ORTHO05D000787 6.0e-17 90.1 59 79.7
BolC8t47877H Brassica oleracea HOM05D000937 ORTHO05D000787 1.0e-16 89.4 58 72.4
Thhalv10010020m.g Eutrema salsugineum HOM05D000937 ORTHO05D000787 1.3e-16 89.0 58 74.1
Sp1g29330 Schrenkiella parvula HOM05D000937 ORTHO05D000787 5.0e-16 87.0 57 75.4
BcaB04g17905 Brassica carinata HOM05D000937 ORTHO05D000787 8.6e-16 86.3 58 70.7
BcaC08g43818 Brassica carinata HOM05D000937 ORTHO05D000787 1.5e-15 85.5 57 71.9
C06p12030 Brassica napus HOM05D000937 ORTHO05D000787 1.5e-15 85.5 57 71.9
BolC6t36337H Brassica oleracea HOM05D000937 ORTHO05D000787 1.5e-15 85.5 57 71.9
Carub.0001s3212 Capsella rubella HOM05D000937 ORTHO05D000787 1.5e-15 85.5 59 74.6
BcaB07g33027 Brassica carinata HOM05D000937 ORTHO05D000787 2.5e-15 84.7 59 76.3
AT1G34060 Arabidopsis thaliana HOM05D000937 ORTHO05D000787 3.3e-15 84.3 58 69.0
BraA09t38784Z Brassica rapa HOM05D000937 ORTHO05D000787 3.3e-15 84.3 57 70.2
A08p08380 Brassica napus HOM05D000937 ORTHO05D000787 5.6e-15 83.6 59 74.6
BraA08t32854Z Brassica rapa HOM05D000937 ORTHO05D000787 5.6e-15 83.6 59 74.6
A09p32430 Brassica napus HOM05D000937 ORTHO05D000787 9.5e-15 82.8 57 68.4
Sp1g29310 Schrenkiella parvula HOM05D000937 ORTHO05D000787 2.8e-14 81.3 57 64.9
Carub.0001s3215 Capsella rubella HOM05D000937 ORTHO05D000787 3.6e-14 80.9 58 67.2
AL1G48560 Arabidopsis lyrata HOM05D000937 ORTHO05D000787 8.1e-14 79.7 58 63.8
Ciclev10003681m.g Citrus clementina HOM05D000937 ORTHO05D000787 1.5e-07 58.9 53 56.6
Aa31LG6G8250 Aethionema arabicum HOM05D000937 ORTHO05D000787 4.3e-07 57.4 55 54.5
Duzib093G1479 Durio zibethinus HOM05D000937 ORTHO05D000787 5.6e-07 57.0 52 55.8
Thecc.08G160000 Theobroma cacao HOM05D000937 ORTHO05D000787 7.3e-07 56.6 52 55.8
Cfa012975 Carpinus fangiana HOM05D000937 ORTHO05D000787 2.8e-06 54.7 52 51.9
Atru.chr13.2000 Acer truncatum HOM05D000937 ORTHO05D000787 3.6e-06 54.3 54 51.9
Sabra02G0051200 Salix brachista HOM05D000937 ORTHO05D000787 3.6e-06 54.3 57 49.1
Thecc.08G159900 Theobroma cacao HOM05D000937 ORTHO05D000787 3.6e-06 54.3 54 55.6
CARHR033490 Cardamine hirsuta HOM05D000937 ORTHO05D000787 4.7e-06 53.9 28 82.1
Glyma.16G162400 Glycine max HOM05D000937 ORTHO05D000787 4.7e-06 53.9 51 54.9
Dinv25901 Davidia involucrata HOM05D000937 ORTHO05D000787 6.2e-06 53.5 53 56.6
Glyma.02G077600 Glycine max HOM05D000937 ORTHO05D000787 6.2e-06 53.5 30 73.3
Glyma.16G160600 Glycine max HOM05D000937 ORTHO05D000787 6.2e-06 53.5 30 73.3
MD05G1033800 Malus domestica HOM05D000937 ORTHO05D000787 6.2e-06 53.5 54 48.1
Gohir.A01G122800 Gossypium hirsutum HOM05D000937 ORTHO05D000787 8.1e-06 53.1 52 51.9


User provided reference genes

Program Settings