Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR030070 Cardamine hirsuta HOM05D000930 ORTHO05D000748 5.4e-33 143.7 69 100.0
A09p40850 Brassica napus HOM05D000930 ORTHO05D000748 9.9e-11 69.7 58 63.8
BolC8t48352H Brassica oleracea HOM05D000930 ORTHO05D000748 2.9e-10 68.2 58 62.1
BcaC07g37972 Brassica carinata HOM05D000930 ORTHO05D000748 1.4e-09 65.9 58 62.1
Carub.0001s2878 Capsella rubella HOM05D000930 ORTHO05D000748 1.4e-09 65.9 58 58.6
AL8G29750 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 4.2e-09 64.3 57 57.9
AT5G54330 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 4.2e-09 64.3 57 57.9
BcaB04g18461 Brassica carinata HOM05D000930 ORTHO05D000748 5.4e-09 63.9 58 60.3
CARHR030080 Cardamine hirsuta HOM05D000930 ORTHO05D000748 7.1e-09 63.5 54 55.6
AL8G29780 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 9.3e-09 63.2 54 57.4
AT5G54450 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 9.3e-09 63.2 54 57.4
BcaB08g34339 Brassica carinata HOM05D000930 ORTHO05D000748 9.3e-09 63.2 58 60.3
BcaB08g34340 Brassica carinata HOM05D000930 ORTHO05D000748 9.3e-09 63.2 58 60.3
CARHR248330 Cardamine hirsuta HOM05D000930 ORTHO05D000748 1.6e-08 62.4 55 54.5
AL8G27440 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 2.1e-08 62.0 52 53.8
CARHR242590 Cardamine hirsuta HOM05D000930 ORTHO05D000748 4.6e-08 60.8 54 50.0
Sp7g14750 Schrenkiella parvula HOM05D000930 ORTHO05D000748 4.6e-08 60.8 58 55.2
BraA10t43262Z Brassica rapa HOM05D000930 ORTHO05D000748 6.0e-08 60.5 58 58.6
Thhalv10023176m.g Eutrema salsugineum HOM05D000930 ORTHO05D000748 1.0e-07 59.7 55 54.5
A10p11670 Brassica napus HOM05D000930 ORTHO05D000748 1.3e-07 59.3 58 58.6
AT5G52940 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 2.3e-07 58.5 54 50.0
AL6G19150 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 3.0e-07 58.2 54 51.9
BcaB08g34341 Brassica carinata HOM05D000930 ORTHO05D000748 3.0e-07 58.2 52 61.5
BcaB05g22146 Brassica carinata HOM05D000930 ORTHO05D000748 5.1e-07 57.4 53 41.5
BraA10t43266Z Brassica rapa HOM05D000930 ORTHO05D000748 5.1e-07 57.4 55 54.5
Carub.0008s1461 Capsella rubella HOM05D000930 ORTHO05D000748 5.1e-07 57.4 55 56.4
BcaB05g22147 Brassica carinata HOM05D000930 ORTHO05D000748 8.7e-07 56.6 54 44.4
BcaC03g14302 Brassica carinata HOM05D000930 ORTHO05D000748 8.7e-07 56.6 54 44.4
C02p16860 Brassica napus HOM05D000930 ORTHO05D000748 8.7e-07 56.6 54 44.4
C07p15380 Brassica napus HOM05D000930 ORTHO05D000748 1.1e-06 56.2 54 44.4
AT5G54420 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 1.5e-06 55.8 55 52.7
BcaB01g04288 Brassica carinata HOM05D000930 ORTHO05D000748 1.5e-06 55.8 54 48.1
CARHR267690 Cardamine hirsuta HOM05D000930 ORTHO05D000748 1.5e-06 55.8 54 51.9
C02p18350 Brassica napus HOM05D000930 ORTHO05D000748 1.9e-06 55.5 54 55.6
BcaB05g22144 Brassica carinata HOM05D000930 ORTHO05D000748 2.5e-06 55.1 54 51.9
BcaC03g14423 Brassica carinata HOM05D000930 ORTHO05D000748 2.5e-06 55.1 54 55.6
BolC2t07975H Brassica oleracea HOM05D000930 ORTHO05D000748 2.5e-06 55.1 54 55.6
BcaB08g35800 Brassica carinata HOM05D000930 ORTHO05D000748 3.3e-06 54.7 52 53.8
BcaC07g37973 Brassica carinata HOM05D000930 ORTHO05D000748 4.3e-06 54.3 58 50.0
A02p10160 Brassica napus HOM05D000930 ORTHO05D000748 4.3e-06 54.3 54 42.6
A02p10200 Brassica napus HOM05D000930 ORTHO05D000748 4.3e-06 54.3 54 50.0
BraA02t06087Z Brassica rapa HOM05D000930 ORTHO05D000748 4.3e-06 54.3 54 42.6
BraA02t06091Z Brassica rapa HOM05D000930 ORTHO05D000748 4.3e-06 54.3 54 50.0
AL8G28780 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 5.6e-06 53.9 54 53.7
BcaB05g22046 Brassica carinata HOM05D000930 ORTHO05D000748 5.6e-06 53.9 54 57.4
A02p10180 Brassica napus HOM05D000930 ORTHO05D000748 5.6e-06 53.9 54 51.9
BraA02t06089Z Brassica rapa HOM05D000930 ORTHO05D000748 5.6e-06 53.9 54 51.9
BcaC03g14304 Brassica carinata HOM05D000930 ORTHO05D000748 7.4e-06 53.5 54 51.9
C03p91150 Brassica napus HOM05D000930 ORTHO05D000748 7.4e-06 53.5 54 51.9
C07p15290 Brassica napus HOM05D000930 ORTHO05D000748 7.4e-06 53.5 56 44.6
CARHR267520 Cardamine hirsuta HOM05D000930 ORTHO05D000748 7.4e-06 53.5 54 50.0
CARHR269250 Cardamine hirsuta HOM05D000930 ORTHO05D000748 9.6e-06 53.1 55 49.1


User provided reference genes

Program Settings