Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.0e-36 155.2 77 100.0
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 4.5e-20 100.9 59 91.5
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 1.0e-19 99.8 59 89.8
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.0e-19 99.8 59 89.8
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.0e-19 99.8 59 89.8
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 1.0e-19 99.8 59 89.8
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 2.9e-19 98.2 59 89.8
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 2.1e-17 92.0 59 81.4
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 3.6e-17 91.3 59 81.4
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 1.0e-16 89.7 59 81.4
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 1.0e-16 89.7 59 81.4
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 1.0e-16 89.7 59 81.4
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.0e-16 89.7 59 81.4
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.0e-16 89.7 59 81.4
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 2.3e-16 88.6 59 79.7
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 5.1e-16 87.4 78 61.5
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 5.1e-16 87.4 59 79.7
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 6.7e-16 87.0 57 80.7
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 6.7e-16 87.0 59 79.7
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.5e-15 85.9 59 79.7
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-15 85.9 59 78.0
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-15 85.9 59 78.0
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.9e-15 85.5 59 79.7
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.9e-15 85.5 59 79.7
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 5.7e-15 84.0 59 79.7
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 5.7e-15 84.0 59 76.3
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 5.7e-15 84.0 59 79.7
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 7.4e-15 83.6 57 77.2
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 7.4e-15 83.6 59 78.0
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 9.7e-15 83.2 59 76.3
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 1.3e-14 82.8 59 78.0
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 1.3e-14 82.8 59 78.0
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 1.3e-14 82.8 59 76.3
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.3e-14 82.8 59 76.3
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.6e-14 82.4 59 79.7
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 2.2e-14 82.0 59 76.3
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 2.2e-14 82.0 59 79.7
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 2.2e-14 82.0 56 78.6
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 2.8e-14 81.6 57 77.2
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 2.8e-14 81.6 57 77.2
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 2.8e-14 81.6 59 76.3
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 3.7e-14 81.3 59 78.0
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 4.8e-14 80.9 57 77.2
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 6.3e-14 80.5 57 77.2
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 6.3e-14 80.5 57 77.2
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 8.2e-14 80.1 57 78.9
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 8.2e-14 80.1 59 76.3
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 8.2e-14 80.1 71 67.6
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 8.2e-14 80.1 59 78.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 8.2e-14 80.1 59 78.0
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 1.1e-13 79.7 59 76.3
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.1e-13 79.7 59 72.9
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 1.4e-13 79.3 57 75.4
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 1.4e-13 79.3 58 74.1
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 1.8e-13 79.0 58 74.1
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.4e-13 78.6 59 74.6
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 2.4e-13 78.6 59 74.6
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 2.4e-13 78.6 59 74.6
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 3.1e-13 78.2 56 76.8
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 4.1e-13 77.8 56 76.8
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 5.3e-13 77.4 57 75.4
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 5.3e-13 77.4 59 72.9
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 5.3e-13 77.4 59 72.9
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 5.3e-13 77.4 59 72.9
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 5.3e-13 77.4 60 68.3
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 6.9e-13 77.0 59 72.9
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 6.9e-13 77.0 56 75.0
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 6.9e-13 77.0 52 75.0
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 9.1e-13 76.6 57 75.4
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.5e-12 75.9 57 75.4
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 1.5e-12 75.9 63 68.3
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.5e-12 75.9 59 72.9
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 2.0e-12 75.5 59 71.2
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 2.0e-12 75.5 56 75.0
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 2.6e-12 75.1 59 69.5
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 5.9e-12 73.9 57 71.9
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 5.9e-12 73.9 57 71.9
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 1.0e-11 73.2 55 74.5
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.0e-11 73.2 43 86.0
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.3e-11 72.8 59 67.8
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.3e-11 72.8 59 69.5
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 2.2e-11 72.0 56 69.6
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.2e-11 72.0 56 71.4
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.2e-11 72.0 56 71.4
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 2.9e-11 71.6 70 64.3
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 2.9e-11 71.6 56 71.4
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 2.9e-11 71.6 59 69.5
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 2.9e-11 71.6 57 68.4
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 3.8e-11 71.2 59 67.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 3.8e-11 71.2 58 70.7
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 3.8e-11 71.2 55 70.9
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 6.5e-11 70.5 56 71.4
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 1.1e-10 69.7 56 69.6
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 1.1e-10 69.7 74 58.1
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-10 69.3 70 62.9
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 2.5e-10 68.6 56 73.2
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 2.5e-10 68.6 57 64.9
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 5.5e-10 67.4 56 67.9
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 2.1e-09 65.5 56 66.1
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 2.1e-09 65.5 56 66.1
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.6e-09 64.3 43 81.4
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 7.9e-09 63.5 57 64.9
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.4e-08 62.8 53 66.0
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 5.1e-08 60.8 62 56.5
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 6.7e-08 60.5 59 62.7
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.1e-07 59.7 53 64.2
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 2.2e-06 55.5 56 57.1
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 2.8e-06 55.1 46 63.0
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 4.8e-06 54.3 59 55.9


User provided reference genes

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