Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 3.7e-103 378.3 195 100.0
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.7e-84 316.2 200 85.5
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 5.7e-80 301.2 195 82.1
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 7.5e-80 300.8 195 81.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 9.8e-80 300.4 195 81.5
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 2.2e-79 299.3 195 81.5
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 7.7e-77 290.8 200 79.0
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.6e-74 283.1 195 80.0
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.6e-74 283.1 195 80.0
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.2e-69 266.9 138 95.7
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 5.9e-69 264.6 138 94.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 3.8e-68 261.9 138 94.2
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 2.8e-66 255.8 216 69.4
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 2.0e-61 239.6 183 71.6
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.1e-59 233.8 173 69.4
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 5.6e-59 231.5 153 77.1
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 5.6e-59 231.5 195 63.6
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 2.1e-58 229.6 191 67.0
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 2.1e-58 229.6 193 64.2
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.8e-58 229.2 162 71.0
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 6.2e-58 228.0 127 87.4
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 6.2e-58 228.0 200 63.0
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 8.0e-58 227.6 155 75.5
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 8.0e-58 227.6 127 88.2
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.1e-57 227.3 163 71.8
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.1e-57 227.3 139 80.6
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.1e-57 227.3 197 62.9
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.4e-57 226.9 127 87.4
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.8e-57 226.5 156 73.7
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 3.1e-57 225.7 139 79.1
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.1e-57 225.7 171 69.0
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 4.0e-57 225.3 165 69.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 4.0e-57 225.3 203 64.0
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 5.2e-57 224.9 165 70.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 6.8e-57 224.6 156 72.4
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 8.9e-57 224.2 156 71.8
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.2e-56 223.8 168 69.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 201 61.7
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 2.0e-56 223.0 200 62.5
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.0e-56 223.0 201 61.7
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 2.6e-56 222.6 201 61.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.6e-56 222.6 144 75.0
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 2.6e-56 222.6 142 78.2
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 202 61.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.4e-56 222.2 152 73.0
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 3.4e-56 222.2 195 65.1
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 151 74.8
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 3.4e-56 222.2 156 73.1
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.4e-56 221.9 168 68.5
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 4.4e-56 221.9 160 71.2
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 5.8e-56 221.5 186 64.0
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 7.5e-56 221.1 166 67.5
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 9.8e-56 220.7 201 61.2
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 9.8e-56 220.7 170 67.1
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 9.8e-56 220.7 165 67.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.3e-55 220.3 122 88.5
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 191 62.3
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 2.9e-55 219.2 152 72.4
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.7e-55 218.8 166 67.5
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 4.9e-55 218.4 143 76.2
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 6.4e-55 218.0 127 83.5
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 6.4e-55 218.0 154 71.4
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 8.3e-55 217.6 122 84.4
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 8.3e-55 217.6 165 68.5
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 8.3e-55 217.6 169 68.6
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.1e-54 217.2 156 69.9
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.4e-54 216.9 138 77.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.4e-54 216.9 162 67.9
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.9e-54 216.5 154 71.4
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 2.4e-54 216.1 123 83.7
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.4e-54 216.1 188 62.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.1e-54 215.3 194 61.3
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.1e-54 215.3 158 67.7
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 5.4e-54 214.9 122 84.4
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 5.4e-54 214.9 139 76.3
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 7.0e-54 214.5 195 61.0
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 7.0e-54 214.5 176 65.9
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 9.2e-54 214.2 135 77.8
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.2e-53 213.8 190 61.1
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.6e-53 213.4 195 60.0
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 1.6e-53 213.4 122 82.8
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 2.7e-53 212.6 130 79.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.3e-52 210.3 121 81.8
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.0e-52 209.1 150 70.0
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.5e-51 206.8 237 53.6
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.9e-51 206.5 189 59.8
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 4.3e-51 205.3 125 78.4
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 5.6e-51 204.9 138 69.6
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 9.5e-51 204.1 139 75.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 3.6e-50 202.2 191 58.6
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.6e-50 202.2 191 56.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 4.0e-49 198.7 190 55.3
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 4.0e-49 198.7 195 55.4
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 4.0e-49 198.7 151 64.9
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 5.2e-49 198.4 124 75.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 2.1e-45 186.4 134 67.2
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 3.0e-44 182.6 165 60.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 2.8e-42 176.0 122 65.6
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.1e-41 174.1 122 67.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.8e-41 173.3 99 83.8
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.4e-40 169.1 122 63.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.3e-39 167.2 122 63.9
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 2.9e-39 166.0 106 74.5
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.9e-39 166.0 122 63.1
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 6.0e-37 158.3 130 66.9
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 3.4e-32 142.5 186 47.8
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 5.8e-32 141.7 112 66.1
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.2e-31 139.8 120 62.5
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.6e-29 133.7 118 62.7
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 6.2e-26 121.7 121 50.4
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 8.7e-20 101.3 126 44.4
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.1e-19 100.9 67 68.7
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.8e-18 96.3 71 64.8
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.2e-15 86.7 45 88.9
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.9e-15 86.3 135 43.7
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.9e-15 85.5 74 60.8
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.9e-15 85.5 74 60.8
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.5e-13 79.3 64 62.5
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.5e-13 79.3 51 72.5
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.3e-12 76.6 114 41.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 2.1e-10 70.1 37 83.8
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 9.3e-06 54.7 36 66.7
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 9.3e-06 54.7 42 52.4


User provided reference genes

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