Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 7.2e-56 220.3 109 100.0
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.9e-46 188.0 107 88.8
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 2.0e-45 185.7 106 87.7
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.6e-45 185.3 110 86.4
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.3e-44 183.0 113 84.1
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.8e-44 181.8 110 83.6
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 8.2e-44 180.3 110 82.7
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 7.0e-43 177.2 103 84.5
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 7.0e-43 177.2 114 80.7
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 9.1e-43 176.8 101 86.1
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 6.5e-41 170.6 115 77.4
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 8.5e-41 170.2 110 80.9
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.6e-39 166.0 107 82.2
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.8e-38 162.5 102 79.4
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 4.4e-37 157.9 114 75.4
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.7e-33 146.0 101 72.3
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 2.0e-29 132.5 83 79.5
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.2e-28 129.0 104 62.5
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 3.7e-28 128.3 99 67.7
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 7.0e-27 124.0 100 64.0
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.1e-27 123.6 99 62.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.2e-26 123.2 99 64.6
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.0e-26 122.5 88 68.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 3.5e-26 121.7 109 57.8
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.9e-26 120.9 100 62.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.7e-26 120.6 95 63.2
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.0e-25 120.2 99 57.6
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.3e-25 119.8 102 60.8
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.7e-25 119.4 88 67.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.7e-25 119.4 96 60.4
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.3e-25 119.0 90 63.3
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 2.3e-25 119.0 107 57.0
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.3e-25 119.0 110 56.4
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.9e-25 118.6 100 60.0
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.8e-25 118.2 105 58.1
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 3.8e-25 118.2 105 58.1
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 3.8e-25 118.2 100 57.0
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 3.8e-25 118.2 99 60.6
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 3.8e-25 118.2 99 60.6
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 5.0e-25 117.9 99 62.6
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.0e-25 117.9 99 60.6
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 8.6e-25 117.1 83 65.1
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 8.6e-25 117.1 79 69.6
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 8.6e-25 117.1 100 56.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 8.6e-25 117.1 88 65.9
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.1e-24 116.7 89 65.2
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.9e-24 115.9 76 69.7
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.5e-24 115.5 103 55.3
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.5e-24 115.5 100 60.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.5e-24 115.5 94 62.8
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 3.3e-24 115.2 72 66.7
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 4.2e-24 114.8 80 66.2
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 5.5e-24 114.4 91 60.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 5.5e-24 114.4 112 55.4
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 7.2e-24 114.0 100 59.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 9.5e-24 113.6 100 59.0
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 9.5e-24 113.6 97 57.7
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.2e-23 113.2 57 86.0
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.2e-23 113.2 81 70.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.2e-23 113.2 103 54.4
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.2e-23 113.2 72 69.4
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.2e-23 113.2 100 59.0
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.6e-23 112.8 62 80.6
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 2.1e-23 112.5 96 62.5
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.8e-23 112.1 106 54.7
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.6e-23 111.7 101 55.4
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 8.0e-23 110.5 96 58.3
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 8.0e-23 110.5 67 73.1
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.8e-22 109.4 88 62.5
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.8e-22 109.4 110 50.9
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.3e-22 109.0 93 62.4
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 4.0e-22 108.2 101 53.5
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 6.8e-22 107.5 64 73.4
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.8e-22 107.5 97 57.7
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 8.9e-22 107.1 98 54.1
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 8.9e-22 107.1 89 60.7
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 8.9e-22 107.1 98 57.1
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.0e-21 105.9 66 71.2
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.0e-21 105.9 86 60.5
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.4e-21 105.1 95 54.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 5.7e-21 104.4 89 59.6
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 9.8e-21 103.6 104 51.0
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 9.8e-21 103.6 103 51.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 9.8e-21 103.6 95 55.8
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 9.8e-21 103.6 104 52.9
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.3e-20 103.2 95 54.7
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-20 103.2 95 54.7
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.3e-20 103.2 95 54.7
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.3e-20 103.2 104 50.0
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.3e-20 103.2 100 55.0
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.3e-20 103.2 100 55.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.2e-20 102.4 94 55.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 2.8e-20 102.1 99 52.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.4e-19 99.8 113 46.9
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.8e-19 99.4 94 52.1
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.8e-19 99.4 97 53.6
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.1e-19 98.6 94 52.1
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.6e-18 96.3 95 54.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.9e-17 92.0 79 54.4
BcaC06g35377 Brassica carinata HOM05D007416 ORTHO05D009329 8.6e-17 90.5 110 51.8
BcaNung06837 Brassica carinata HOM05D007416 ORTHO05D009329 8.6e-17 90.5 110 51.8
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.9e-16 89.4 78 56.4
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.6e-15 86.3 78 55.1
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.4e-14 83.2 94 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 9.2e-11 70.5 68 51.5


User provided reference genes

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