Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 2.5e-110 402.1 203 100.0
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 2.9e-103 378.6 203 94.1
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 3.8e-103 378.3 203 92.6
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 3.8e-103 378.3 203 92.6
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 8.5e-103 377.1 203 92.6
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 2.5e-102 375.6 203 92.6
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 2.5e-102 375.6 203 92.1
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 9.4e-102 373.6 203 93.1
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 1.2e-101 373.2 203 92.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 3.6e-101 371.7 201 92.5
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 2.3e-100 369.0 203 91.6
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 2.8e-98 362.1 205 90.7
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.4e-97 359.8 203 90.6
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 8.6e-95 350.5 205 88.8
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 2.8e-93 345.5 209 84.7
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.6e-91 339.0 184 91.8
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 4.9e-90 334.7 204 86.8
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 2.9e-87 325.5 199 83.9
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 2.1e-85 319.3 209 76.1
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 3.4e-83 312.0 187 87.2
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.1e-62 243.8 214 64.0
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.3e-62 242.3 203 66.0
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 9.6e-62 240.7 213 62.4
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 9.6e-62 240.7 223 60.1
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 4.7e-61 238.4 219 62.6
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 6.2e-61 238.0 207 63.8
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 2.4e-60 236.1 203 63.5
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 6.8e-60 234.6 214 62.6
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 6.8e-60 234.6 210 61.0
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 2.6e-59 232.6 211 62.1
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.4e-59 232.3 214 60.3
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.4e-59 232.3 214 60.3
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 3.4e-59 232.3 208 63.0
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.4e-59 232.3 220 58.6
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 4.4e-59 231.9 209 60.3
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 5.8e-59 231.5 215 60.5
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.8e-59 231.5 208 61.1
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.8e-59 231.5 220 59.5
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.8e-59 231.5 220 59.5
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 5.8e-59 231.5 228 58.8
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 7.6e-59 231.1 215 60.9
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 9.9e-59 230.7 209 60.3
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.3e-58 230.3 220 59.1
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 1.3e-58 230.3 147 75.5
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.7e-58 229.9 209 61.2
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 1.7e-58 229.9 213 61.0
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 2.2e-58 229.6 210 60.0
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 2.9e-58 229.2 209 59.8
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 2.9e-58 229.2 147 77.6
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 3.8e-58 228.8 218 59.2
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 4.9e-58 228.4 217 59.4
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 4.9e-58 228.4 212 60.4
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 6.4e-58 228.0 211 62.6
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 8.4e-58 227.6 204 59.3
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 8.4e-58 227.6 194 63.9
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 1.4e-57 226.9 147 76.9
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.4e-57 226.9 207 60.9
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 2.4e-57 226.1 214 59.3
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 2.4e-57 226.1 145 77.9
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 4.2e-57 225.3 218 57.8
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 5.4e-57 224.9 216 58.3
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 7.1e-57 224.6 149 74.5
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 7.1e-57 224.6 218 55.5
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 2.1e-56 223.0 148 77.0
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 2.7e-56 222.6 214 60.3
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 3.5e-56 222.2 147 75.5
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 6.0e-56 221.5 219 58.4
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 6.0e-56 221.5 149 75.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 6.0e-56 221.5 149 75.8
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 6.0e-56 221.5 223 57.0
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 6.0e-56 221.5 219 58.0
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 7.8e-56 221.1 227 56.8
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 7.8e-56 221.1 220 55.9
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 7.8e-56 221.1 218 57.3
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.3e-55 220.3 147 74.8
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 3.9e-55 218.8 218 56.0
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.1e-55 218.4 219 57.5
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 8.7e-55 217.6 138 77.5
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.1e-54 217.2 230 56.1
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.1e-54 217.2 246 52.4
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.5e-54 216.9 140 77.9
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.5e-54 216.1 131 81.7
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 3.3e-54 215.7 207 57.5
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.3e-54 215.7 215 56.7
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 4.3e-54 215.3 210 57.6
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.3e-54 215.3 232 54.7
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 7.3e-54 214.5 143 74.1
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 2.1e-53 213.0 151 70.9
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 3.6e-53 212.2 202 58.9
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 4.8e-53 211.8 130 82.3
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.1e-52 210.7 150 74.7
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 5.3e-52 208.4 265 50.2
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.0e-51 206.5 240 50.0
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 9.9e-51 204.1 204 57.8
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 2.9e-50 202.6 224 54.0
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.4e-50 201.4 190 57.9
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 6.4e-50 201.4 191 58.1
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 8.4e-50 201.1 182 60.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.4e-49 200.3 197 57.4
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 1.9e-49 199.9 175 61.7
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 3.2e-49 199.1 183 58.5
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 7.1e-49 198.0 139 71.9
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.6e-48 196.8 120 77.5
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.6e-48 196.8 202 55.4
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.6e-48 196.8 206 54.9
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 3.5e-48 195.7 190 58.4
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 4.6e-48 195.3 151 64.2
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 7.9e-48 194.5 176 58.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.3e-47 193.7 185 57.8
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.0e-47 192.6 145 66.9
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 5.1e-47 191.8 150 66.0
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 8.7e-47 191.0 128 72.7
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 8.7e-47 191.0 217 53.5
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.1e-46 190.7 203 54.7
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.9e-46 189.9 286 43.4
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 5.6e-46 188.3 145 66.2
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 7.3e-46 188.0 165 64.2
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 8.1e-45 184.5 211 49.3
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.4e-44 183.7 220 50.9
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 5.3e-44 181.8 160 56.9
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 4.9e-42 175.3 156 60.3
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.1e-41 174.1 144 63.2
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 5.5e-41 171.8 198 53.0
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 9.3e-41 171.0 144 61.1
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.3e-39 167.2 182 54.9
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.3e-39 166.4 156 59.6
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 5.1e-39 165.2 125 65.6
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 6.7e-39 164.9 133 62.4
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 4.8e-37 158.7 173 54.9
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 4.8e-37 158.7 118 66.9
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 4.8e-37 158.7 145 59.3
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.1e-36 157.5 164 56.7
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 2.4e-36 156.4 130 60.0
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 3.1e-36 156.0 174 55.2
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 6.9e-36 154.8 145 57.9
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 6.9e-36 154.8 190 48.4
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.5e-35 153.7 163 52.1
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.6e-35 152.9 164 53.0
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 3.4e-35 152.5 135 56.3
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.8e-34 149.1 108 69.4
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.0e-31 141.0 168 53.0
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 8.7e-31 137.9 103 67.0
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 2.4e-28 129.8 193 43.5
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 2.9e-26 122.9 132 50.8
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 6.1e-24 115.2 157 42.7
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.4e-19 99.4 168 35.1
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 3.2e-17 92.8 62 75.8
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 2.7e-16 89.7 114 42.1
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.4e-15 87.4 88 55.7
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 5.7e-14 82.0 65 64.6
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 2.9e-10 69.7 39 84.6
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 2.3e-07 60.1 40 70.0


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