Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR026390 Cardamine hirsuta HOM05D000573 ORTHO05D000425 6.3e-35 150.2 75 100.0
CARHR026400 Cardamine hirsuta HOM05D000573 ORTHO05D000425 8.2e-19 96.7 50 94.0
AT1G24735 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 5.3e-18 94.0 64 75.0
A08p11180 Brassica napus HOM05D000573 ORTHO05D000425 2.0e-17 92.0 50 88.0
BraA08t33114Z Brassica rapa HOM05D000573 ORTHO05D000425 2.0e-17 92.0 50 88.0
Thhalv10008647m.g Eutrema salsugineum HOM05D000573 ORTHO05D000425 2.0e-17 92.0 50 88.0
BcaC01g01667 Brassica carinata HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
BcaC06g35242 Brassica carinata HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
A08p26760 Brassica napus HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
C03p73240 Brassica napus HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
BolC3t19621H Brassica oleracea HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
BolC7t42343H Brassica oleracea HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
Sp1g23100 Schrenkiella parvula HOM05D000573 ORTHO05D000425 7.7e-17 90.1 50 86.0
BraA08t34621Z Brassica rapa HOM05D000573 ORTHO05D000425 1.3e-16 89.4 70 67.1
BcaC07g37827 Brassica carinata HOM05D000573 ORTHO05D000425 1.7e-16 89.0 50 86.0
C07p18330 Brassica napus HOM05D000573 ORTHO05D000425 1.7e-16 89.0 50 86.0
BolC8t48213H Brassica oleracea HOM05D000573 ORTHO05D000425 1.7e-16 89.0 50 86.0
A07p12400 Brassica napus HOM05D000573 ORTHO05D000425 2.2e-16 88.6 50 86.0
BraA07t29020Z Brassica rapa HOM05D000573 ORTHO05D000425 2.2e-16 88.6 50 86.0
CARHR026410 Cardamine hirsuta HOM05D000573 ORTHO05D000425 2.9e-16 88.2 50 82.0
Carub.0001s2541 Capsella rubella HOM05D000573 ORTHO05D000425 8.5e-16 86.7 51 84.3
AL1G40220 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.9e-15 85.5 49 83.7
BcaB03g14019 Brassica carinata HOM05D000573 ORTHO05D000425 1.9e-15 85.5 50 80.0
BcaB03g12044 Brassica carinata HOM05D000573 ORTHO05D000425 5.5e-15 84.0 49 81.6
Aa31LG7G9370 Aethionema arabicum HOM05D000573 ORTHO05D000425 7.2e-15 83.6 48 79.2
Manes.15G136300 Manihot esculenta HOM05D000573 ORTHO05D000425 1.2e-12 76.3 46 73.9
AL2G26940 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 2.0e-12 75.5 50 74.0
AT1G67990 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 2.6e-12 75.1 50 70.0
BcaC03g14895 Brassica carinata HOM05D000573 ORTHO05D000425 2.6e-12 75.1 46 78.3
C02p23710 Brassica napus HOM05D000573 ORTHO05D000425 2.6e-12 75.1 46 78.3
BolC2t08498H Brassica oleracea HOM05D000573 ORTHO05D000425 2.6e-12 75.1 46 78.3
BraA02t06530Z Brassica rapa HOM05D000573 ORTHO05D000425 2.6e-12 75.1 46 78.3
Sp5g23000 Schrenkiella parvula HOM05D000573 ORTHO05D000425 2.6e-12 75.1 50 74.0
AT1G67980 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 5.7e-12 73.9 50 72.0
BcaB05g24327 Brassica carinata HOM05D000573 ORTHO05D000425 5.7e-12 73.9 50 72.0
A02p14620 Brassica napus HOM05D000573 ORTHO05D000425 5.7e-12 73.9 46 76.1
THA.LOC104807886 Tarenaya hassleriana HOM05D000573 ORTHO05D000425 5.7e-12 73.9 43 81.4
BcaB03g15141 Brassica carinata HOM05D000573 ORTHO05D000425 9.7e-12 73.2 50 70.0
AL2G26930 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.3e-11 72.8 50 68.0
Sp5g23010 Schrenkiella parvula HOM05D000573 ORTHO05D000425 1.7e-11 72.4 50 70.0
Aa31LG7G9350 Aethionema arabicum HOM05D000573 ORTHO05D000425 2.2e-11 72.0 46 71.7
BcaC08g46225 Brassica carinata HOM05D000573 ORTHO05D000425 2.2e-11 72.0 50 70.0
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 2.2e-11 72.0 50 70.0
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 2.2e-11 72.0 50 70.0
BolC6t39227H Brassica oleracea HOM05D000573 ORTHO05D000425 2.2e-11 72.0 50 70.0
Potri.010G104400 Populus trichocarpa HOM05D000573 ORTHO05D000425 2.2e-11 72.0 52 67.3
BolC2t08500H Brassica oleracea HOM05D000573 ORTHO05D000425 8.3e-11 70.1 52 61.5
CARHR060630 Cardamine hirsuta HOM05D000573 ORTHO05D000425 8.3e-11 70.1 50 66.0
Potri.008G136600 Populus trichocarpa HOM05D000573 ORTHO05D000425 8.3e-11 70.1 50 64.0
BcaC03g14893 Brassica carinata HOM05D000573 ORTHO05D000425 1.1e-10 69.7 52 61.5
A02p14640 Brassica napus HOM05D000573 ORTHO05D000425 1.1e-10 69.7 52 61.5
C02p23690 Brassica napus HOM05D000573 ORTHO05D000425 1.1e-10 69.7 52 61.5
Manes.17G085500 Manihot esculenta HOM05D000573 ORTHO05D000425 2.4e-10 68.6 43 69.8
BraA02t06531Z Brassica rapa HOM05D000573 ORTHO05D000425 5.3e-10 67.4 52 59.6
Thhalv10019081m.g Eutrema salsugineum HOM05D000573 ORTHO05D000425 5.3e-10 67.4 52 61.5
Manes.15G136400 Manihot esculenta HOM05D000573 ORTHO05D000425 7.0e-10 67.0 42 69.0
TWI56G0064 Tripterygium wilfordii HOM05D000573 ORTHO05D000425 1.2e-09 66.2 44 65.9
Duzib151G0908 Durio zibethinus HOM05D000573 ORTHO05D000425 2.7e-09 65.1 40 75.0
Dinv06123 Davidia involucrata HOM05D000573 ORTHO05D000425 4.5e-09 64.3 43 67.4
Thecc.02G308300 Theobroma cacao HOM05D000573 ORTHO05D000425 5.9e-09 63.9 41 70.7
Manes.10G025100 Manihot esculenta HOM05D000573 ORTHO05D000425 7.7e-09 63.5 43 62.8
Dinv06125 Davidia involucrata HOM05D000573 ORTHO05D000425 1.0e-08 63.2 39 74.4
Cpa.g.sc2.170 Carica papaya HOM05D000573 ORTHO05D000425 1.3e-08 62.8 40 67.5
Phvul.L001746 Phaseolus vulgaris HOM05D000573 ORTHO05D000425 2.2e-08 62.0 40 72.5
GSVIVG01010468001 Vitis vinifera HOM05D000573 ORTHO05D000425 2.2e-08 62.0 45 68.9
COL.COLO4_27619 Corchorus olitorius HOM05D000573 ORTHO05D000425 2.9e-08 61.6 42 71.4
Haze_20722 Corylus avellana HOM05D000573 ORTHO05D000425 2.9e-08 61.6 45 64.4
Gohir.A04G139200 Gossypium hirsutum HOM05D000573 ORTHO05D000425 2.9e-08 61.6 40 67.5
Gorai.N022200 Gossypium raimondii HOM05D000573 ORTHO05D000425 2.9e-08 61.6 40 67.5
Hma1.2p1_0299F.1_g117865 Hydrangea macrophylla HOM05D000573 ORTHO05D000425 2.9e-08 61.6 40 67.5
Hma1.2p1_0299F.1_g117870 Hydrangea macrophylla HOM05D000573 ORTHO05D000425 2.9e-08 61.6 40 67.5
FAN07G0915 Fragaria x ananassa HOM05D000573 ORTHO05D000425 5.0e-08 60.8 41 70.7
Thecc.04G185100 Theobroma cacao HOM05D000573 ORTHO05D000425 6.5e-08 60.5 39 66.7
FvH4_4g23870 Fragaria vesca HOM05D000573 ORTHO05D000425 8.5e-08 60.1 44 63.6
Gohir.D04G182200 Gossypium hirsutum HOM05D000573 ORTHO05D000425 8.5e-08 60.1 41 63.4
Glyma.08G103900 Glycine max HOM05D000573 ORTHO05D000425 1.1e-07 59.7 38 71.1
THA.LOC104825058 Tarenaya hassleriana HOM05D000573 ORTHO05D000425 1.1e-07 59.7 49 61.2
CANSAT01G3206 Cannabis sativa HOM05D000573 ORTHO05D000425 1.5e-07 59.3 43 67.4
Cfa017441 Carpinus fangiana HOM05D000573 ORTHO05D000425 1.5e-07 59.3 39 71.8
Duzib268G0860 Durio zibethinus HOM05D000573 ORTHO05D000425 1.5e-07 59.3 42 64.3
MD13G1117900 Malus domestica HOM05D000573 ORTHO05D000425 1.5e-07 59.3 39 69.2
MD16G1119200 Malus domestica HOM05D000573 ORTHO05D000425 1.5e-07 59.3 39 69.2
GSVIVG01010469001 Vitis vinifera HOM05D000573 ORTHO05D000425 1.5e-07 59.3 53 58.5
Nn2g15848 Nelumbo nucifera HOM05D000573 ORTHO05D000425 1.9e-07 58.9 39 66.7
Nn2g15849 Nelumbo nucifera HOM05D000573 ORTHO05D000425 1.9e-07 58.9 38 68.4
Nn3g16486 Nelumbo nucifera HOM05D000573 ORTHO05D000425 3.2e-07 58.2 40 62.5
CSS0009133 Camellia sinensis var. sinensis HOM05D000573 ORTHO05D000425 4.2e-07 57.8 37 73.0
CANSAT01G2085 Cannabis sativa HOM05D000573 ORTHO05D000425 4.2e-07 57.8 43 65.1
Medtr4g094368 Medicago truncatula HOM05D000573 ORTHO05D000425 4.2e-07 57.8 41 61.0
GSVIVG01010466001 Vitis vinifera HOM05D000573 ORTHO05D000425 4.2e-07 57.8 36 75.0
Migut.L00902 Erythranthe guttata HOM05D000573 ORTHO05D000425 5.5e-07 57.4 35 77.1
Rhsim12G0026500 Rhododendron simsii HOM05D000573 ORTHO05D000425 5.5e-07 57.4 37 75.7
VMungo0251G2628 Vigna mungo HOM05D000573 ORTHO05D000425 5.5e-07 57.4 40 65.0
Prupe.2G107300 Prunus persica HOM05D000573 ORTHO05D000425 7.2e-07 57.0 44 65.9
RcHm_v2.0_Chr4g0430461 Rosa chinensis HOM05D000573 ORTHO05D000425 7.2e-07 57.0 44 59.1
SGA_v2.0_scaffold391G50636 Striga asiatica HOM05D000573 ORTHO05D000425 7.2e-07 57.0 35 74.3
Ca_18323_v3 Cicer arietinum L. HOM05D000573 ORTHO05D000425 9.4e-07 56.6 41 58.5
Lj4g0003266 Lotus japonicus HOM05D000573 ORTHO05D000425 9.4e-07 56.6 39 66.7
Eucgr.H04646 Eucalyptus grandis HOM05D000573 ORTHO05D000425 1.2e-06 56.2 35 77.1
Eucgr.H04648 Eucalyptus grandis HOM05D000573 ORTHO05D000425 1.2e-06 56.2 35 77.1
Eucgr.H04650 Eucalyptus grandis HOM05D000573 ORTHO05D000425 1.2e-06 56.2 35 77.1
Psat7g095800 Pisum sativum HOM05D000573 ORTHO05D000425 1.2e-06 56.2 41 58.5
Rhsim12G0026700 Rhododendron simsii HOM05D000573 ORTHO05D000425 1.2e-06 56.2 35 74.3
CANSAT01G0852 Cannabis sativa HOM05D000573 ORTHO05D000425 1.6e-06 55.8 43 65.1
Cc11_g06680 Coffea canephora HOM05D000573 ORTHO05D000425 1.6e-06 55.8 38 65.8
Duzib251G0446 Durio zibethinus HOM05D000573 ORTHO05D000425 1.6e-06 55.8 45 57.8
Oeu060811.1 Olea europaea HOM05D000573 ORTHO05D000425 1.6e-06 55.8 38 68.4
Prupe.2G107200 Prunus persica HOM05D000573 ORTHO05D000425 1.6e-06 55.8 37 73.0
Migut.K00719 Erythranthe guttata HOM05D000573 ORTHO05D000425 2.1e-06 55.5 35 74.3
MD02G1230900 Malus domestica HOM05D000573 ORTHO05D000425 2.1e-06 55.5 35 74.3
Migut.E00021 Erythranthe guttata HOM05D000573 ORTHO05D000425 2.7e-06 55.1 35 74.3
Migut.E01163 Erythranthe guttata HOM05D000573 ORTHO05D000425 2.7e-06 55.1 35 74.3
Migut.E01174 Erythranthe guttata HOM05D000573 ORTHO05D000425 2.7e-06 55.1 35 74.3
Duzib248G1048 Durio zibethinus HOM05D000573 ORTHO05D000425 3.6e-06 54.7 40 60.0
Glyma.05G147000 Glycine max HOM05D000573 ORTHO05D000425 3.6e-06 54.7 45 62.2
Hma1.2p1_0234F.1_g098430 Hydrangea macrophylla HOM05D000573 ORTHO05D000425 3.6e-06 54.7 45 53.3
SGA_v2.0_scaffold9G04734 Striga asiatica HOM05D000573 ORTHO05D000425 3.6e-06 54.7 35 68.6
TPR.G23820 Trifolium pratense HOM05D000573 ORTHO05D000425 3.6e-06 54.7 41 56.1
AUR62005608 Chenopodium quinoa HOM05D000573 ORTHO05D000425 4.7e-06 54.3 43 60.5
ClCG11G013730 Citrullus lanatus HOM05D000573 ORTHO05D000425 4.7e-06 54.3 46 54.3
Lalb_Chr12g0206201 Lupinus albus HOM05D000573 ORTHO05D000425 4.7e-06 54.3 51 52.9
SalBow2G2361 Salvia bowleyana HOM05D000573 ORTHO05D000425 4.7e-06 54.3 38 63.2
PGSC0003DMG400006448 Solanum tuberosum HOM05D000573 ORTHO05D000425 4.7e-06 54.3 35 68.6
MSTRG.512 Avicennia marina HOM05D000573 ORTHO05D000425 6.1e-06 53.9 35 68.6
AUR62024120 Chenopodium quinoa HOM05D000573 ORTHO05D000425 6.1e-06 53.9 47 57.4
Peaxi162Scf00316g00055 Petunia axillaris HOM05D000573 ORTHO05D000425 6.1e-06 53.9 35 68.6
Sed0027015 Sechium edule HOM05D000573 ORTHO05D000425 6.1e-06 53.9 43 60.5
SGA_v2.0_scaffold9G04722 Striga asiatica HOM05D000573 ORTHO05D000425 6.1e-06 53.9 35 68.6
COL.COLO4_20387 Corchorus olitorius HOM05D000573 ORTHO05D000425 8.0e-06 53.5 37 62.2
Migut.E00022 Erythranthe guttata HOM05D000573 ORTHO05D000425 8.0e-06 53.5 38 60.5


User provided reference genes

Program Settings