Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR026210 Cardamine hirsuta HOM05D008071 ORTHO05D009954 2.1e-77 292.4 151 100.0
Carub.0001s2525 Capsella rubella HOM05D008071 ORTHO05D009954 1.9e-35 152.9 134 56.0
A07p12520 Brassica napus HOM05D008071 ORTHO05D009954 7.7e-32 141.0 144 55.6
CARHR026190 Cardamine hirsuta HOM05D008071 ORTHO05D009954 9.4e-30 134.0 146 49.3
BcaC01g01683 Brassica carinata HOM05D008071 ORTHO05D009954 5.1e-28 128.3 143 46.2
BolC3t19602H Brassica oleracea HOM05D008071 ORTHO05D009954 5.1e-28 128.3 143 46.2
A07p31290 Brassica napus HOM05D008071 ORTHO05D009954 1.1e-27 127.1 148 44.6
BraA07t30762Z Brassica rapa HOM05D008071 ORTHO05D009954 1.1e-27 127.1 148 44.6
AT5G05020 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 1.5e-27 126.7 152 45.4
C03p73050 Brassica napus HOM05D008071 ORTHO05D009954 1.5e-27 126.7 143 46.2
Sp1g22940 Schrenkiella parvula HOM05D008071 ORTHO05D009954 1.5e-27 126.7 145 44.1
BcaB03g14033 Brassica carinata HOM05D008071 ORTHO05D009954 2.0e-27 126.3 144 51.4
Carub.0006s3123 Capsella rubella HOM05D008071 ORTHO05D009954 2.0e-27 126.3 152 46.7
A09p39180 Brassica napus HOM05D008071 ORTHO05D009954 7.4e-27 124.4 141 51.1
C05p25190 Brassica napus HOM05D008071 ORTHO05D009954 2.2e-26 122.9 141 50.4
BraA09t39418Z Brassica rapa HOM05D008071 ORTHO05D009954 2.2e-26 122.9 141 50.4
BraA07t29031Z Brassica rapa HOM05D008071 ORTHO05D009954 1.1e-25 120.6 130 52.3
AL1G40040 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 1.4e-25 120.2 145 47.6
BraA08t34634Z Brassica rapa HOM05D008071 ORTHO05D009954 2.4e-25 119.4 143 43.4
Thhalv10009039m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 2.4e-25 119.4 145 47.6
Thhalv10009029m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 5.3e-25 118.2 145 46.2
BcaB03g14030 Brassica carinata HOM05D008071 ORTHO05D009954 9.1e-25 117.5 126 53.2
BolC3t19605H Brassica oleracea HOM05D008071 ORTHO05D009954 1.5e-24 116.7 139 44.6
AL4G39460 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 5.9e-24 114.8 150 44.0
C03p73100 Brassica napus HOM05D008071 ORTHO05D009954 5.9e-24 114.8 139 43.9
AT2G41390 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 2.9e-23 112.5 147 43.5
A08p26850 Brassica napus HOM05D008071 ORTHO05D009954 5.0e-23 111.7 140 43.6
Carub.0001s2523 Capsella rubella HOM05D008071 ORTHO05D009954 6.5e-23 111.3 145 42.8
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 8.5e-23 110.9 135 42.2
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 1.1e-22 110.5 135 42.2
A04p31550 Brassica napus HOM05D008071 ORTHO05D009954 1.1e-22 110.5 147 40.8
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 1.1e-22 110.5 135 42.2
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 1.1e-22 110.5 135 42.2
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 1.1e-22 110.5 135 42.2
BraA04t18611Z Brassica rapa HOM05D008071 ORTHO05D009954 1.1e-22 110.5 147 40.8
BolC4t28398H Brassica oleracea HOM05D008071 ORTHO05D009954 3.2e-22 109.0 147 40.8
BcaB03g12034 Brassica carinata HOM05D008071 ORTHO05D009954 4.2e-22 108.6 142 40.8
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 4.2e-22 108.6 141 41.8
C04p68980 Brassica napus HOM05D008071 ORTHO05D009954 5.5e-22 108.2 147 40.8
AT2G41400 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 2.1e-21 106.3 123 46.3
BcaC06g35221 Brassica carinata HOM05D008071 ORTHO05D009954 3.6e-21 105.5 101 53.5
C07p18520 Brassica napus HOM05D008071 ORTHO05D009954 3.6e-21 105.5 101 53.5
Sp5g23220 Schrenkiella parvula HOM05D008071 ORTHO05D009954 6.1e-21 104.8 135 40.7
BcaC02g12899 Brassica carinata HOM05D008071 ORTHO05D009954 7.9e-21 104.4 145 42.8
BolC7t42363H Brassica oleracea HOM05D008071 ORTHO05D009954 7.9e-21 104.4 101 52.5
THA.LOC104827708 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 1.4e-20 103.6 147 40.1
Carub.0001s2524 Capsella rubella HOM05D008071 ORTHO05D009954 5.2e-20 101.7 145 42.1
Sp2g26770 Schrenkiella parvula HOM05D008071 ORTHO05D009954 1.1e-19 100.5 126 46.8
THA.LOC104827706 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 1.1e-19 100.5 130 43.1
Aa31LG7G9180 Aethionema arabicum HOM05D008071 ORTHO05D009954 2.2e-18 96.3 144 39.6
BcaB03g12032 Brassica carinata HOM05D008071 ORTHO05D009954 2.8e-18 95.9 151 39.7
CARHR136500 Cardamine hirsuta HOM05D008071 ORTHO05D009954 4.8e-18 95.1 127 41.7
BcaC05g26476 Brassica carinata HOM05D008071 ORTHO05D009954 1.7e-15 86.7 88 59.1
BcaB03g14032 Brassica carinata HOM05D008071 ORTHO05D009954 9.4e-14 80.9 71 56.3
QL07p015274 Quercus lobata HOM05D008071 ORTHO05D009954 9.4e-14 80.9 116 39.7
BcaC08g45854 Brassica carinata HOM05D008071 ORTHO05D009954 1.2e-13 80.5 148 35.1
BcaB03g15516 Brassica carinata HOM05D008071 ORTHO05D009954 2.1e-13 79.7 147 32.7
BolC5t31253H Brassica oleracea HOM05D008071 ORTHO05D009954 1.8e-12 76.6 141 41.1
Rhsim03G0040600 Rhododendron simsii HOM05D008071 ORTHO05D009954 2.6e-11 72.8 131 29.8
Dinv06965 Davidia involucrata HOM05D008071 ORTHO05D009954 4.8e-10 68.6 128 32.8
Thhalv10009714m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 6.3e-10 68.2 77 49.4
AL2G27010 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 7.0e-09 64.7 72 47.2
Nitab4.5_0000123g0160 Nicotiana tabacum HOM05D013183 ORTHO05D009954 5.9e-08 61.6 129 27.1
ATR0006G003 Amborella trichopoda HOM05D008071 ORTHO05D009954 1.0e-07 60.8 117 28.2
Nitab4.5_0006448g0040 Nicotiana tabacum HOM05D013183 ORTHO05D009954 1.0e-07 60.8 129 26.4
C06p36450 Brassica napus HOM05D008071 ORTHO05D009954 1.1e-06 57.4 52 48.1
Eucgr.K01698 Eucalyptus grandis HOM05D008071 ORTHO05D009954 1.1e-06 57.4 118 31.4
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 3.2e-06 55.8 135 31.9
Eucgr.K01697 Eucalyptus grandis HOM05D008071 ORTHO05D009954 5.5e-06 55.1 118 30.5


User provided reference genes

Program Settings