Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR024980 Cardamine hirsuta HOM05D006518 ORTHO05D008270 2.1e-61 238.8 116 100.0
AL1G38610 Arabidopsis lyrata HOM05D006518 ORTHO05D008270 5.5e-30 134.4 72 90.3
AT1G26940 Arabidopsis thaliana HOM05D006518 ORTHO05D008270 5.5e-30 134.4 72 90.3
CARHR024970 Cardamine hirsuta HOM05D006518 ORTHO05D008270 5.5e-30 134.4 72 90.3
Carub.0001s2404 Capsella rubella HOM05D006518 ORTHO05D008270 6.1e-29 131.0 72 87.5
Thhalv10008695m.g Eutrema salsugineum HOM05D006518 ORTHO05D008270 6.1e-29 131.0 72 87.5
Sp1g21840 Schrenkiella parvula HOM05D006518 ORTHO05D008270 6.1e-29 131.0 72 87.5
BcaC05g26368 Brassica carinata HOM05D006518 ORTHO05D008270 1.4e-28 129.8 72 87.5
A09p40360 Brassica napus HOM05D006518 ORTHO05D008270 1.4e-28 129.8 72 87.5
BolC5t31137H Brassica oleracea HOM05D006518 ORTHO05D008270 1.4e-28 129.8 72 87.5
BraA09t39533Z Brassica rapa HOM05D006518 ORTHO05D008270 1.4e-28 129.8 72 87.5
TPR.G11706 Trifolium pratense HOM05D006518 ORTHO05D008270 1.8e-28 129.4 72 86.1
Atru.chr11.1828 Acer truncatum HOM05D006518 ORTHO05D008270 5.2e-28 127.9 72 84.7
Aa31LG7G8200 Aethionema arabicum HOM05D006518 ORTHO05D008270 8.8e-28 127.1 72 83.3
arahy.Tifrunner.gnm1.ann1.251ATU Arachis hypogaea HOM05D006518 ORTHO05D008270 8.8e-28 127.1 72 84.7
arahy.Tifrunner.gnm1.ann1.YAGN0V Arachis hypogaea HOM05D006518 ORTHO05D008270 8.8e-28 127.1 72 84.7
Psat2g127240 Pisum sativum HOM05D006518 ORTHO05D008270 8.8e-28 127.1 72 84.7
Medtr5g039210 Medicago truncatula HOM05D006518 ORTHO05D008270 1.1e-27 126.7 72 84.7
Phvul.002G088300 Phaseolus vulgaris HOM05D006518 ORTHO05D008270 1.5e-27 126.3 72 81.9
Ca_04765_v3 Cicer arietinum L. HOM05D006518 ORTHO05D008270 2.0e-27 125.9 72 83.3
Gohir.D02G124600 Gossypium hirsutum HOM05D006518 ORTHO05D008270 2.0e-27 125.9 72 84.7
Lj2g0006932 Lotus japonicus HOM05D006518 ORTHO05D008270 2.6e-27 125.6 72 83.3
TWI18G0776 Tripterygium wilfordii HOM05D006518 ORTHO05D008270 3.3e-27 125.2 72 83.3
THA.LOC104822922 Tarenaya hassleriana HOM05D006518 ORTHO05D008270 4.4e-27 124.8 72 83.3
VMungo1215G0700 Vigna mungo HOM05D006518 ORTHO05D008270 4.4e-27 124.8 72 80.6
COL.COLO4_22979 Corchorus olitorius HOM05D006518 ORTHO05D008270 5.7e-27 124.4 72 83.3
Duzib251G0137 Durio zibethinus HOM05D006518 ORTHO05D008270 5.7e-27 124.4 72 81.9
QL03p064826 Quercus lobata HOM05D006518 ORTHO05D008270 5.7e-27 124.4 72 83.3
CiPaw.06G082900 Carya illinoinensis HOM05D006518 ORTHO05D008270 7.4e-27 124.0 72 83.3
Gorai.005G140100 Gossypium raimondii HOM05D006518 ORTHO05D008270 1.3e-26 123.2 72 81.9
Lalb_Chr17g0340541 Lupinus albus HOM05D006518 ORTHO05D008270 1.3e-26 123.2 72 83.3
Migut.L01314 Erythranthe guttata HOM05D006518 ORTHO05D008270 1.7e-26 122.9 72 80.6
Hma1.2p1_0598F.1_g186750 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 1.7e-26 122.9 72 81.9
Hma1.2p1_0598F.1_g186760 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 1.7e-26 122.9 72 81.9
Psat2g127200 Pisum sativum HOM05D006518 ORTHO05D008270 2.2e-26 122.5 72 80.6
vmacro01240 Vaccinium macrocarpon HOM05D006518 ORTHO05D008270 2.2e-26 122.5 72 81.9
MD13G1074200 Malus domestica HOM05D006518 ORTHO05D008270 2.8e-26 122.1 72 81.9
Manes.05G099400 Manihot esculenta HOM05D006518 ORTHO05D008270 2.8e-26 122.1 72 81.9
PGSC0003DMG400000875 Solanum tuberosum HOM05D006518 ORTHO05D008270 3.7e-26 121.7 72 80.6
Thecc.02G349100 Theobroma cacao HOM05D006518 ORTHO05D008270 3.7e-26 121.7 72 80.6
Glyma.02G105500 Glycine max HOM05D006518 ORTHO05D008270 4.8e-26 121.3 72 79.2
Gohir.A03G099700 Gossypium hirsutum HOM05D006518 ORTHO05D008270 6.3e-26 120.9 72 81.9
MD16G1075600 Malus domestica HOM05D006518 ORTHO05D008270 6.3e-26 120.9 72 80.6
RcHm_v2.0_Chr4g0440101 Rosa chinensis HOM05D006518 ORTHO05D008270 6.3e-26 120.9 72 81.9
Peaxi162Scf00026g00297 Petunia axillaris HOM05D006518 ORTHO05D008270 8.2e-26 120.6 72 80.6
Prupe.1G271800 Prunus persica HOM05D006518 ORTHO05D008270 8.2e-26 120.6 72 79.2
Sabra10G0008100 Salix brachista HOM05D006518 ORTHO05D008270 8.2e-26 120.6 72 80.6
FvH4_4g31590 Fragaria vesca HOM05D006518 ORTHO05D008270 1.1e-25 120.2 72 80.6
FAN12G4204 Fragaria x ananassa HOM05D006518 ORTHO05D008270 1.1e-25 120.2 72 80.6
FAN17G1605 Fragaria x ananassa HOM05D006518 ORTHO05D008270 1.1e-25 120.2 72 80.6
Rhsim12G0061300 Rhododendron simsii HOM05D006518 ORTHO05D008270 1.1e-25 120.2 71 81.7
TAR374G0832 Trochodendron aralioides HOM05D006518 ORTHO05D008270 1.1e-25 120.2 72 79.2
Cpa.g.sc183.33 Carica papaya HOM05D006518 ORTHO05D008270 1.4e-25 119.8 72 80.6
FAN07G2562 Fragaria x ananassa HOM05D006518 ORTHO05D008270 1.4e-25 119.8 71 81.7
Solyc01g010590.2 Solanum lycopersicum HOM05D006518 ORTHO05D008270 1.4e-25 119.8 72 80.6
Sed0000225 Sechium edule HOM05D006518 ORTHO05D008270 1.8e-25 119.4 72 80.6
CAN.G38.25 Capsicum annuum HOM05D006518 ORTHO05D008270 2.4e-25 119.0 72 77.8
FAN22G1577 Fragaria x ananassa HOM05D006518 ORTHO05D008270 2.4e-25 119.0 72 79.2
Sopen01g006240 Solanum pennellii HOM05D006518 ORTHO05D008270 2.4e-25 119.0 72 80.6
Aqoxy3G03336 Aquilegia oxysepala HOM05D006518 ORTHO05D008270 3.1e-25 118.6 72 77.8
Haze_12032 Corylus avellana HOM05D006518 ORTHO05D008270 3.1e-25 118.6 72 79.2
Haze_12039 Corylus avellana HOM05D006518 ORTHO05D008270 3.1e-25 118.6 72 79.2
Dinv16627 Davidia involucrata HOM05D006518 ORTHO05D008270 3.1e-25 118.6 72 77.8
Glyma.01G044900 Glycine max HOM05D006518 ORTHO05D008270 3.1e-25 118.6 72 80.6
Actinidia19864 Actinidia chinensis HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 79.2
C08p22660 Brassica napus HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 79.2
BolC8t49904H Brassica oleracea HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 79.2
ClCG11G007330 Citrullus lanatus HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 80.6
HanXRQChr17g0545181 Helianthus annuus HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 77.8
unitig_22.g6524 Utricularia gibba HOM05D006518 ORTHO05D008270 4.1e-25 118.2 72 80.6
Potri.010G012900 Populus trichocarpa HOM05D006518 ORTHO05D008270 5.3e-25 117.9 72 79.2
MELO3C008553.2 Cucumis melo HOM05D006518 ORTHO05D008270 7.0e-25 117.5 72 79.2
CsaV3_2G010590 Cucumis sativus L. HOM05D006518 ORTHO05D008270 7.0e-25 117.5 72 79.2
Eucgr.G02518 Eucalyptus grandis HOM05D006518 ORTHO05D008270 7.0e-25 117.5 72 77.8
A08p27650 Brassica napus HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 79.2
BraA08t34702Z Brassica rapa HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 79.2
CANSAT64G2267 Cannabis sativa HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 79.2
Ciclev10032751m.g Citrus clementina HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 79.2
Cc11_g13260 Coffea canephora HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 79.2
MBI02_g34551_MAGBIO Magnolia biondii HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 76.4
Nn4g23099 Nelumbo nucifera HOM05D006518 ORTHO05D008270 9.1e-25 117.1 72 77.8
AUR62028810 Chenopodium quinoa HOM05D006518 ORTHO05D008270 1.2e-24 116.7 72 77.8
Nitab4.5_0000141g0290 Nicotiana tabacum HOM05D006518 ORTHO05D008270 2.0e-24 115.9 72 77.8
Sc04g0004950 Simmondsia chinensis HOM05D006518 ORTHO05D008270 2.0e-24 115.9 72 75.0
GSVIVG01020024001 Vitis vinifera HOM05D006518 ORTHO05D008270 2.0e-24 115.9 72 77.8
Lsat_1_v5_gn_3_52920 Lactuca sativa HOM05D006518 ORTHO05D008270 3.5e-24 115.2 72 75.0
Zm00001eb114970 Zea mays HOM05D006518 ORTHO05D008270 4.5e-24 114.8 72 77.8
CSS0004247 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 5.9e-24 114.4 72 75.0
CSS0005609 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 5.9e-24 114.4 72 75.0
AUR62005750 Chenopodium quinoa HOM05D006518 ORTHO05D008270 5.9e-24 114.4 72 76.4
PGR119G2153 Punica granatum HOM05D006518 ORTHO05D008270 5.9e-24 114.4 72 76.4
ECA246G2657 Erigeron canadensis HOM05D006518 ORTHO05D008270 7.7e-24 114.0 72 75.0
Hund25256 Selenicereus undatus HOM05D006518 ORTHO05D008270 1.0e-23 113.6 72 76.4
SGA_v2.0_scaffold302G47835 Striga asiatica HOM05D006518 ORTHO05D008270 1.3e-23 113.2 72 75.0
SalBow2G0178 Salvia bowleyana HOM05D006518 ORTHO05D008270 1.7e-23 112.8 72 76.4
SalBow2G1811 Salvia bowleyana HOM05D006518 ORTHO05D008270 1.7e-23 112.8 72 76.4
HPP92_016855 Vanilla planifolia HOM05D006518 ORTHO05D008270 1.7e-23 112.8 72 73.6
EL10Ac6g13177 Beta vulgaris HOM05D006518 ORTHO05D008270 2.2e-23 112.5 72 73.6
Os11g0602900 Oryza sativa ssp. japonica HOM05D006518 ORTHO05D008270 2.2e-23 112.5 72 73.6
Ah.03g135280 Amaranthus hybridus HOM05D006518 ORTHO05D008270 5.0e-23 111.3 72 72.2
MSTRG.7814 Avicennia marina HOM05D006518 ORTHO05D008270 5.0e-23 111.3 72 73.6
ATR0684G233 Amborella trichopoda HOM05D006518 ORTHO05D008270 8.5e-23 110.5 72 73.6
DCAR_031032 Daucus carota HOM05D006518 ORTHO05D008270 1.1e-22 110.2 72 73.6
PSO063G1773 Papaver somniferum HOM05D006518 ORTHO05D008270 1.9e-22 109.4 72 72.2
Oeu028298.1 Olea europaea HOM05D006518 ORTHO05D008270 2.5e-22 109.0 72 72.2
SMO358G0251 Selaginella moellendorffii HOM05D006518 ORTHO05D008270 4.2e-22 108.2 72 72.2
Nitab4.5_0003566g0030 Nicotiana tabacum HOM05D006518 ORTHO05D008270 9.4e-22 107.1 65 80.0
Pp3c22_14990 Physcomitrium patens HOM05D006518 ORTHO05D008270 1.2e-21 106.7 72 72.2
AagrBONN_evm.TU.Sc2ySwM_344.4129 Anthoceros agrestis HOM05D006518 ORTHO05D008270 6.1e-21 104.4 72 69.4
Mapoly0071s0062 Marchantia polymorpha HOM05D006518 ORTHO05D008270 4.0e-20 101.7 72 68.1
AL1G41130 Arabidopsis lyrata HOM05D006518 ORTHO05D008270 2.8e-18 95.5 58 81.0
Sed0010295 Sechium edule HOM05D006518 ORTHO05D008270 3.2e-14 82.0 64 67.2
Cre06.g292500 Chlamydomonas reinhardtii HOM05D006518 ORTHO05D008270 1.6e-13 79.7 60 65.0
MCO05G545 Micromonas commoda HOM05D006518 ORTHO05D008270 2.3e-12 75.9 69 60.9
Lj6A791G23 Lonicera japonica HOM05D006518 ORTHO05D008270 1.4e-09 66.6 44 72.7
CDE09G0040 Ceratophyllum demersum HOM05D006518 ORTHO05D008270 1.8e-09 66.2 44 72.7


User provided reference genes

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