Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 6.7e-185 650.6 340 100.0
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.8e-174 615.9 340 94.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 9.1e-174 613.6 340 93.2
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.9e-172 608.6 340 93.2
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 6.5e-172 607.4 341 93.5
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 1.6e-170 602.8 340 92.4
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 4.7e-170 601.3 341 92.1
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.8e-169 599.4 341 92.1
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.8e-169 599.4 341 92.1
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 7.2e-163 577.4 322 92.9
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.8e-159 565.5 341 87.4
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 2.3e-153 545.8 340 82.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 2.2e-143 512.7 329 79.6
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.8e-142 509.6 341 81.2
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 7.0e-142 507.7 336 78.3
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 6.1e-138 494.6 336 76.8
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 8.0e-138 494.2 336 76.5
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 3.1e-137 492.3 336 76.5
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 5.2e-137 491.5 337 75.1
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 2.0e-136 489.6 335 74.6
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.6e-136 489.2 336 76.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 2.6e-136 489.2 333 73.3
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 2.6e-136 489.2 334 76.6
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 3.4e-136 488.8 332 75.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 7.5e-136 487.6 333 76.9
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.3e-135 486.9 336 75.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 2.9e-135 485.7 336 72.9
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 6.4e-135 484.6 333 75.1
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.4e-135 484.6 336 75.9
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 8.3e-135 484.2 336 74.4
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 2.4e-134 482.6 333 74.8
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 3.2e-134 482.3 331 75.8
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 4.1e-134 481.9 338 73.4
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 5.4e-134 481.5 312 78.2
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 7.0e-134 481.1 333 76.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 9.2e-134 480.7 336 73.5
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.6e-133 479.9 336 74.1
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 2.7e-133 479.2 336 73.2
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.7e-133 479.2 336 74.4
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.0e-133 478.0 332 74.7
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.7e-132 476.5 332 73.2
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.3e-132 476.1 326 73.6
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 2.3e-132 476.1 336 73.8
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 3.0e-132 475.7 326 74.2
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.0e-132 475.7 322 75.8
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 3.9e-132 475.3 336 73.5
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 8.6e-132 474.2 332 75.3
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 3.3e-131 472.2 373 69.2
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 3.3e-131 472.2 333 72.7
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 5.6e-131 471.5 333 72.7
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 7.3e-131 471.1 333 75.1
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 7.3e-131 471.1 321 75.1
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.6e-130 469.9 335 72.2
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 6.2e-130 468.0 330 71.8
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.4e-129 466.8 330 71.8
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.8e-129 466.5 336 72.6
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 6.8e-129 464.5 323 72.8
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.6e-128 462.6 334 72.8
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 2.6e-128 462.6 334 71.9
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 9.8e-128 460.7 334 72.2
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 2.9e-127 459.1 334 72.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 3.7e-127 458.8 334 72.2
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 3.7e-127 458.8 337 71.2
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 4.9e-127 458.4 353 69.4
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 8.3e-127 457.6 336 71.7
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.1e-126 457.2 321 72.6
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.1e-126 457.2 333 71.8
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.4e-126 456.8 344 68.6
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 1.9e-126 456.4 325 74.2
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 2.4e-126 456.1 333 71.2
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 3.5e-125 452.2 336 68.2
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 7.3e-123 444.5 332 69.0
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 3.6e-122 442.2 326 70.9
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 4.7e-122 441.8 334 67.7
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 4.4e-120 435.3 336 69.0
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.6e-117 426.8 357 65.0
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.8e-117 424.5 394 61.4
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 3.3e-115 419.1 336 68.2
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 7.3e-115 417.9 321 67.6
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.6e-114 416.8 336 65.2
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.1e-113 414.1 298 72.1
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.1e-113 414.1 282 75.2
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 4.0e-113 412.1 336 64.6
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.8e-105 386.7 333 62.5
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.2e-103 379.8 336 62.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.9e-102 376.7 329 62.0
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 5.4e-102 375.2 340 60.3
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 9.9e-96 354.4 333 53.5
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 8.4e-95 351.3 331 55.3
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 9.3e-94 347.8 256 69.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.0e-87 327.8 325 52.6
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.3e-84 317.4 242 66.9
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.5e-83 313.9 326 50.9
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.4e-81 307.4 206 76.7
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.4e-81 306.6 197 77.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.4e-78 297.4 330 47.6
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 2.8e-74 283.1 201 72.6
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 6.5e-71 271.9 181 75.7
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 4.6e-69 265.8 333 45.6
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.7e-67 258.1 370 46.2
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 3.7e-66 256.1 358 42.5
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.8e-66 255.8 330 43.0
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.8e-65 253.8 241 59.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 3.5e-56 223.0 177 63.8
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.0e-48 197.2 149 69.8
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.9e-46 190.7 177 50.3
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 8.5e-39 165.2 327 31.8
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.9e-38 164.1 305 38.7
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.9e-38 164.1 283 39.6
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 5.7e-35 152.5 126 66.7
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.1e-33 148.3 124 62.9
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.8e-29 133.7 86 77.9
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.2e-24 118.2 338 31.1
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.3e-20 104.0 74 64.9
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 8.1e-13 79.0 59 72.9
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.4e-12 78.2 143 41.3
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.4e-12 78.2 143 41.3


User provided reference genes

Program Settings