Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR011690 Cardamine hirsuta HOM05D000621 ORTHO05D000421 9.3e-56 219.9 108 100.0
BolC8t48105H Brassica oleracea HOM05D000621 ORTHO05D000421 1.4e-16 89.7 105 49.5
AT1G11420 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.9e-16 89.4 94 50.0
Thhalv10027025m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 3.6e-15 85.1 92 53.3
AL1G22510 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 8.0e-15 84.0 95 49.5
Carub.0004s2996 Capsella rubella HOM05D000621 ORTHO05D000421 1.8e-14 82.8 102 50.0
A08p10370 Brassica napus HOM05D000621 ORTHO05D000421 6.7e-14 80.9 94 48.9
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.0e-13 79.3 108 48.1
BraA08t33037Z Brassica rapa HOM05D000621 ORTHO05D000421 5.7e-13 77.8 95 47.4
Thhalv10001344m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 1.3e-12 76.6 102 47.1
BcaB04g18122 Brassica carinata HOM05D000621 ORTHO05D000421 1.7e-12 76.3 95 46.3
AT2G47230 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 2.2e-12 75.9 102 44.1
AL4G46780 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.1e-11 73.6 102 44.1
CARHR142610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 3.1e-11 72.0 93 48.4
Carub.0001s2450 Capsella rubella HOM05D000621 ORTHO05D000421 5.3e-11 71.2 98 45.9
AL1G39190 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 7.0e-11 70.9 98 46.9
Carub.0001s0241 Capsella rubella HOM05D000621 ORTHO05D000421 1.2e-10 70.1 101 44.6
AL1G12810 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.6e-10 69.7 103 45.6
Thhalv10001340m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 5.9e-10 67.8 100 42.0
AT1G26540 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.0e-09 67.0 93 47.3
BraA02t07651Z Brassica rapa HOM05D000621 ORTHO05D000421 1.7e-09 66.2 100 40.0
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 2.2e-09 65.9 97 44.3
Aa31LG1G28530 Aethionema arabicum HOM05D000621 ORTHO05D000421 5.0e-09 64.7 100 42.0
BcaC02g12582 Brassica carinata HOM05D000621 ORTHO05D000421 6.5e-09 64.3 97 43.3
BolC4t21700H Brassica oleracea HOM05D000621 ORTHO05D000421 6.5e-09 64.3 97 43.3
AT1G03300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.1e-08 63.5 102 43.1
Thhalv10020194m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 2.5e-08 62.4 96 43.8
CARHR002610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 5.5e-08 61.2 103 41.7
C04p00670 Brassica napus HOM05D000621 ORTHO05D000421 7.2e-08 60.8 97 42.3
Potri.014G117800 Populus trichocarpa HOM05D000621 ORTHO05D000421 1.2e-07 60.1 93 40.9
A05p41650 Brassica napus HOM05D000621 ORTHO05D000421 6.1e-07 57.8 94 42.6
A09p54300 Brassica napus HOM05D000621 ORTHO05D000421 6.1e-07 57.8 95 31.6
C08p37180 Brassica napus HOM05D000621 ORTHO05D000421 6.1e-07 57.8 95 31.6
BraA05t22885Z Brassica rapa HOM05D000621 ORTHO05D000421 6.1e-07 57.8 94 42.6
Manes.01G230800 Manihot esculenta HOM05D000621 ORTHO05D000421 6.1e-07 57.8 94 36.2
BcaB06g29457 Brassica carinata HOM05D000621 ORTHO05D000421 8.0e-07 57.4 103 42.7
BcaC05g29812 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-06 57.0 93 41.9
BcaC05g30032 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-06 57.0 98 44.9
A01p41220 Brassica napus HOM05D000621 ORTHO05D000421 1.0e-06 57.0 101 37.6
BNapus_Darmor_BZH_scaffold_78p00490 Brassica napus HOM05D000621 ORTHO05D000421 1.0e-06 57.0 101 37.6
C05p60860 Brassica napus HOM05D000621 ORTHO05D000421 1.0e-06 57.0 93 41.9
BolC5t34743H Brassica oleracea HOM05D000621 ORTHO05D000421 1.0e-06 57.0 93 41.9
BcaC07g40715 Brassica carinata HOM05D000621 ORTHO05D000421 1.8e-06 56.2 95 31.6
BolC8t51295H Brassica oleracea HOM05D000621 ORTHO05D000421 1.8e-06 56.2 95 31.6
Carub.0005s2902 Capsella rubella HOM05D000621 ORTHO05D000421 1.8e-06 56.2 97 33.0
Duzib211G0322 Durio zibethinus HOM05D000621 ORTHO05D000421 1.8e-06 56.2 94 37.2
QL12p018838 Quercus lobata HOM05D000621 ORTHO05D000421 1.8e-06 56.2 96 36.5
BolC1t05784H Brassica oleracea HOM05D000621 ORTHO05D000421 2.3e-06 55.8 101 34.7
BraA09t40842Z Brassica rapa HOM05D000621 ORTHO05D000421 2.3e-06 55.8 95 30.5
Cfa005755 Carpinus fangiana HOM05D000621 ORTHO05D000421 3.0e-06 55.5 95 34.7
DCAR_002907 Daucus carota HOM05D000621 ORTHO05D000421 8.8e-06 53.9 93 33.3


User provided reference genes

Program Settings