Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR011350 Cardamine hirsuta HOM05D001771 ORTHO05D010310 9.7e-36 152.9 75 100.0
Thhalv10006699m.g Eutrema salsugineum HOM05D001771 ORTHO05D001876 4.4e-12 74.3 39 94.9
A09p64520 Brassica napus HOM05D001771 ORTHO05D001876 2.2e-11 72.0 40 85.0
BraA09t41801Z Brassica rapa HOM05D001771 ORTHO05D002740 2.2e-11 72.0 40 85.0
Sabra11G0031600 Salix brachista HOM05D001771 ORTHO05D001876 2.8e-11 71.6 44 79.5
C08p48320 Brassica napus HOM05D001771 ORTHO05D002740 4.8e-11 70.9 40 82.5
BcaC02g10583 Brassica carinata HOM05D001771 ORTHO05D001876 1.4e-10 69.3 52 69.2
C04p27210 Brassica napus HOM05D001771 ORTHO05D001876 1.4e-10 69.3 52 69.2
BolC4t24253H Brassica oleracea HOM05D001771 ORTHO05D001876 1.4e-10 69.3 52 69.2
AL1G22180 Arabidopsis lyrata HOM05D001771 ORTHO05D001876 4.1e-10 67.8 39 84.6
Ca_00295_v3 Cicer arietinum L. HOM05D001771 ORTHO05D010310 9.1e-10 66.6 40 80.0
ClCG03G005630 Citrullus lanatus HOM05D001771 ORTHO05D001876 9.1e-10 66.6 42 76.2
Nitab4.5_0007390g0010 Nicotiana tabacum HOM05D001771 ORTHO05D001876 1.6e-09 65.9 47 68.1
Lsat_1_v5_gn_4_55580 Lactuca sativa HOM05D001771 ORTHO05D001876 3.5e-09 64.7 40 75.0
vmacro22269 Vaccinium macrocarpon HOM05D001771 ORTHO05D001876 3.5e-09 64.7 40 75.0
CiPaw.10G121000 Carya illinoinensis HOM05D001771 ORTHO05D001876 4.5e-09 64.3 39 79.5
Thhalv10023227m.g Eutrema salsugineum HOM05D001771 ORTHO05D001876 4.5e-09 64.3 40 80.0
MBI18_g13203_MAGBIO Magnolia biondii HOM05D001771 ORTHO05D010310 4.5e-09 64.3 39 79.5
Nn8g40358 Nelumbo nucifera HOM05D001771 ORTHO05D010310 4.5e-09 64.3 41 73.2
Aa31LG2G9410 Aethionema arabicum HOM05D001771 ORTHO05D001876 5.9e-09 63.9 39 82.1
AL2G15150 Arabidopsis lyrata HOM05D001771 ORTHO05D001876 5.9e-09 63.9 39 82.1
Haze_06544 Corylus avellana HOM05D001771 ORTHO05D001876 5.9e-09 63.9 39 79.5
RcHm_v2.0_Chr7g0189991 Rosa chinensis HOM05D061369 ORTHO05D010829 5.9e-09 63.9 40 75.0
TAR627G0702 Trochodendron aralioides HOM05D001771 ORTHO05D001876 7.7e-09 63.5 40 75.0
Dinv40518 Davidia involucrata HOM05D001771 ORTHO05D001876 1.3e-08 62.8 39 76.9
Thhalv10023689m.g Eutrema salsugineum HOM05D001771 ORTHO05D001876 1.3e-08 62.8 43 74.4
AUR62019629 Chenopodium quinoa HOM05D001771 ORTHO05D001876 2.9e-08 61.6 43 67.4
Sed0018004 Sechium edule HOM05D001771 ORTHO05D010310 2.9e-08 61.6 40 72.5
CSS0037079 Camellia sinensis var. sinensis HOM05D001771 ORTHO05D001876 3.8e-08 61.2 40 72.5
AUR62031664 Chenopodium quinoa HOM05D001771 ORTHO05D001876 3.8e-08 61.2 40 72.5
Gohir.D06G211500 Gossypium hirsutum HOM05D001771 ORTHO05D001876 3.8e-08 61.2 40 72.5
AUR62016929 Chenopodium quinoa HOM05D001771 ORTHO05D001876 5.0e-08 60.8 41 65.9
Gohir.A01G011900 Gossypium hirsutum HOM05D001771 ORTHO05D001876 6.5e-08 60.5 39 74.4
Hma1.2p1_0191F.1_g083430 Hydrangea macrophylla HOM05D001771 ORTHO05D001876 6.5e-08 60.5 40 70.0
Nn5g28733 Nelumbo nucifera HOM05D001771 ORTHO05D010310 6.5e-08 60.5 39 71.8
vmacro10905 Vaccinium macrocarpon HOM05D001771 ORTHO05D001876 6.5e-08 60.5 39 71.8
DCAR_023502 Daucus carota HOM05D001771 ORTHO05D001876 8.5e-08 60.1 40 70.0
RcHm_v2.0_Chr5g0007181 Rosa chinensis HOM05D001771 ORTHO05D023729 8.5e-08 60.1 51 64.7
AUR62014751 Chenopodium quinoa HOM05D001771 ORTHO05D001876 1.1e-07 59.7 39 69.2
Nn1g09167 Nelumbo nucifera HOM05D063783 ORTHO05D010310 1.1e-07 59.7 40 67.5
SGA_v2.0_scaffold22G09742 Striga asiatica HOM05D001771 ORTHO05D001876 1.1e-07 59.7 39 71.8
Gorai.007G256000 Gossypium raimondii HOM05D001771 ORTHO05D010310 1.9e-07 58.9 39 71.8
Sed0014586 Sechium edule HOM05D001771 ORTHO05D001876 2.5e-07 58.5 38 71.1
Dinv11937 Davidia involucrata HOM05D001771 ORTHO05D001876 4.2e-07 57.8 39 69.2
BcaNung03851 Brassica carinata HOM05D001771 ORTHO05D001876 5.5e-07 57.4 54 55.6
Actinidia05596 Actinidia chinensis HOM05D001771 ORTHO05D001876 7.2e-07 57.0 40 65.0
VMungo0251G2688 Vigna mungo HOM05D009237 ORTHO05D010310 7.2e-07 57.0 40 67.5
BraA03t09729Z Brassica rapa HOM05D001771 ORTHO05D001876 2.1e-06 55.5 39 69.2
Sp1g09830 Schrenkiella parvula HOM05D001771 ORTHO05D001876 4.7e-06 54.3 29 93.1
QL05p037029 Quercus lobata HOM05D001771 ORTHO05D001876 6.1e-06 53.9 39 69.2
DCAR_028121 Daucus carota HOM05D001771 ORTHO05D001876 8.0e-06 53.5 39 61.5


User provided reference genes

Program Settings