Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR009970 Cardamine hirsuta HOM05D004775 ORTHO05D005351 2.2e-116 422.2 197 100.0
AL1G20520 Arabidopsis lyrata HOM05D004775 ORTHO05D005351 4.0e-113 411.4 197 95.9
Carub.0001s0930 Capsella rubella HOM05D004775 ORTHO05D005351 8.8e-113 410.2 198 96.0
AT1G09920 Arabidopsis thaliana HOM05D004775 ORTHO05D005351 1.3e-108 396.4 197 93.9
BolC8t48959H Brassica oleracea HOM05D004775 ORTHO05D005351 1.9e-107 392.5 196 90.8
BcaC07g38533 Brassica carinata HOM05D004775 ORTHO05D005351 3.3e-107 391.7 196 90.8
BraA08t35340Z Brassica rapa HOM05D004775 ORTHO05D005351 9.5e-107 390.2 196 90.3
Thhalv10008829m.g Eutrema salsugineum HOM05D004775 ORTHO05D005351 9.5e-107 390.2 193 93.8
A08p34290 Brassica napus HOM05D004775 ORTHO05D005351 4.7e-106 387.9 196 89.3
BcaC05g24832 Brassica carinata HOM05D004775 ORTHO05D005351 8.0e-106 387.1 196 88.8
BolC5t29556H Brassica oleracea HOM05D004775 ORTHO05D005351 8.0e-106 387.1 196 91.3
Sp1g08560 Schrenkiella parvula HOM05D004775 ORTHO05D005351 2.3e-105 385.6 192 92.7
C08p13270 Brassica napus HOM05D004775 ORTHO05D005351 1.5e-99 366.3 184 91.3
C05p08040 Brassica napus HOM05D004775 ORTHO05D005351 5.2e-97 357.8 181 91.7
THA.LOC104823690 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 3.4e-96 355.1 196 82.1
Aa31LG1G4980 Aethionema arabicum HOM05D000583 ORTHO05D000442 4.4e-96 354.8 194 84.0
A06p06630 Brassica napus HOM05D004775 ORTHO05D005351 5.8e-96 354.4 181 90.1
BraA06t23877Z Brassica rapa HOM05D004775 ORTHO05D005351 5.8e-96 354.4 181 90.1
THA.LOC104816787 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 1.9e-91 339.3 194 79.9
Gohir.A01G125800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 1.5e-80 303.1 196 71.4
COL.COLO4_35296 Corchorus olitorius HOM05D004775 ORTHO05D005351 3.4e-80 302.0 196 71.9
Thecc.08G074700 Theobroma cacao HOM05D004775 ORTHO05D005351 2.9e-79 298.9 196 71.9
Atru.chr13.955 Acer truncatum HOM05D004775 ORTHO05D005351 8.3e-79 297.4 193 71.5
Gohir.D01G113700 Gossypium hirsutum HOM05D004775 ORTHO05D005351 1.4e-78 296.6 196 69.9
Gorai.002G138100 Gossypium raimondii HOM05D004775 ORTHO05D005351 1.4e-78 296.6 196 69.9
Duzib093G0042 Durio zibethinus HOM05D004775 ORTHO05D005351 2.4e-78 295.8 196 69.9
MD15G1389500 Malus domestica HOM05D004775 ORTHO05D005351 3.2e-78 295.4 196 69.9
Gohir.A06G030500 Gossypium hirsutum HOM05D004775 ORTHO05D005351 4.1e-78 295.0 196 69.9
Gohir.D05G220600 Gossypium hirsutum HOM05D004775 ORTHO05D005351 5.4e-78 294.7 196 69.9
Gohir.A05G216900 Gossypium hirsutum HOM05D004775 ORTHO05D005351 9.2e-78 293.9 196 69.9
Duzib041G0637 Durio zibethinus HOM05D004775 ORTHO05D005351 1.2e-77 293.5 216 65.3
Duzib116G0735 Durio zibethinus HOM05D004775 ORTHO05D005351 1.2e-77 293.5 196 68.9
Gorai.010G032800 Gossypium raimondii HOM05D004775 ORTHO05D005351 2.1e-77 292.7 196 68.9
TWI56G0975 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 2.7e-77 292.4 201 68.7
Gohir.D06G029800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 4.6e-77 291.6 196 68.9
Potri.002G109800 Populus trichocarpa HOM05D004775 ORTHO05D005351 4.6e-77 291.6 196 68.9
CsaV3_3G048130 Cucumis sativus L. HOM05D004775 ORTHO05D005351 6.0e-77 291.2 202 68.8
MELO3C003503.2 Cucumis melo HOM05D004775 ORTHO05D005351 7.8e-77 290.8 202 68.8
TWI12G1154 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 1.3e-76 290.0 196 69.4
LjContig00408g0019215 Lotus japonicus HOM05D004775 ORTHO05D005351 1.7e-76 289.7 198 66.2
Prupe.1G538600 Prunus persica HOM05D004775 ORTHO05D005351 1.7e-76 289.7 196 69.4
QL12p039787 Quercus lobata HOM05D004775 ORTHO05D005351 6.6e-76 287.7 199 69.3
TWI36G1537 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 1.9e-75 286.2 196 68.4
Manes.18G057500 Manihot esculenta HOM05D004775 ORTHO05D005351 5.6e-75 284.6 194 69.6
Ciclev10002525m.g Citrus clementina HOM05D004775 ORTHO05D005351 9.6e-75 283.9 199 66.8
TPR.G27047 Trifolium pratense HOM05D004775 ORTHO05D005351 1.6e-74 283.1 196 65.3
CiPaw.07G162400 Carya illinoinensis HOM05D004775 ORTHO05D005351 2.8e-74 282.3 196 66.8
PGR042G0432 Punica granatum HOM05D004775 ORTHO05D005351 2.8e-74 282.3 196 64.8
Gorai.009G227600 Gossypium raimondii HOM05D004775 ORTHO05D005351 8.1e-74 280.8 196 68.9
Sed0023619 Sechium edule HOM05D004775 ORTHO05D005351 8.1e-74 280.8 201 65.7
Sed0025083 Sechium edule HOM05D004775 ORTHO05D005351 1.1e-73 280.4 201 66.2
Actinidia10268 Actinidia chinensis HOM05D004775 ORTHO05D005351 2.4e-73 279.3 196 66.3
CANSAT25G1480 Cannabis sativa HOM05D004775 ORTHO05D005351 3.1e-73 278.9 188 66.5
Lalb_Chr17g0344651 Lupinus albus HOM05D004775 ORTHO05D005351 5.2e-73 278.1 194 63.9
MSTRG.24993 Avicennia marina HOM05D004775 ORTHO05D005351 8.9e-73 277.3 188 66.5
Medtr3g111440 Medicago truncatula HOM05D004775 ORTHO05D005351 8.9e-73 277.3 196 65.3
Ca_15537_v3 Cicer arietinum L. HOM05D000583 ORTHO05D000442 1.2e-72 276.9 196 65.3
Dinv42587 Davidia involucrata HOM05D004775 ORTHO05D005351 1.5e-72 276.6 196 65.3
Glyma.02G216500 Glycine max HOM05D004775 ORTHO05D005351 3.4e-72 275.4 199 63.3
Peaxi162Scf00962g00039 Petunia axillaris HOM05D004775 ORTHO05D005351 4.4e-72 275.0 196 64.8
MSTRG.932 Avicennia marina HOM05D004775 ORTHO05D005351 5.8e-72 274.6 188 66.5
Nitab4.5_0018050g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 7.6e-72 274.2 196 65.8
RcHm_v2.0_Chr7g0233601 Rosa chinensis HOM05D004775 ORTHO05D005351 7.6e-72 274.2 196 65.3
Psat2g064440 Pisum sativum HOM05D004775 ORTHO05D005351 1.3e-71 273.5 200 61.0
Migut.C00072 Erythranthe guttata HOM05D004775 ORTHO05D005351 2.2e-71 272.7 192 65.1
Glyma.14G183500 Glycine max HOM05D004775 ORTHO05D005351 2.2e-71 272.7 198 62.1
Cc10_g08310 Coffea canephora HOM05D004775 ORTHO05D005351 3.8e-71 271.9 196 66.3
Lalb_Chr11g0064841 Lupinus albus HOM05D004775 ORTHO05D005351 1.1e-70 270.4 190 63.7
CAN.G1104.13 Capsicum annuum HOM05D004775 ORTHO05D005351 1.9e-70 269.6 196 62.8
Solyc04g076670.3 Solanum lycopersicum HOM05D004775 ORTHO05D005351 1.9e-70 269.6 194 66.0
Sopen04g030390 Solanum pennellii HOM05D004775 ORTHO05D005351 1.9e-70 269.6 194 66.0
Nitab4.5_0003184g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 2.4e-70 269.2 196 66.3
Hma1.2p1_0125F.1_g058660 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 3.2e-70 268.9 193 66.8
TAR381G0646 Trochodendron aralioides HOM05D004775 ORTHO05D005351 4.2e-70 268.5 196 61.7
Solyc12g088070.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 5.4e-70 268.1 196 63.8
CSS0014871 Camellia sinensis var. sinensis HOM05D004775 ORTHO05D005351 7.1e-70 267.7 186 66.1
MD08G1206200 Malus domestica HOM05D004775 ORTHO05D005351 9.3e-70 267.3 181 69.1
Psat0s3268g0200 Pisum sativum HOM05D004775 ORTHO05D005351 1.2e-69 266.9 196 63.8
FAN08G1925 Fragaria x ananassa HOM05D004775 ORTHO05D005351 1.6e-69 266.5 196 62.8
Cpa.g.sc177.17 Carica papaya HOM05D004775 ORTHO05D005351 4.6e-69 265.0 187 66.8
FAN18G1173 Fragaria x ananassa HOM05D004775 ORTHO05D005351 4.6e-69 265.0 196 62.2
Aqoxy6G00652 Aquilegia oxysepala HOM05D004775 ORTHO05D005351 1.0e-68 263.8 196 60.7
arahy.Tifrunner.gnm1.ann1.ZY5S91 Arachis hypogaea HOM05D004775 ORTHO05D005351 1.3e-68 263.5 185 65.9
CAN.G723.7 Capsicum annuum HOM05D004775 ORTHO05D005351 1.3e-68 263.5 194 63.9
Oeu038164.1 Olea europaea HOM05D004775 ORTHO05D005351 1.3e-68 263.5 189 64.6
FAN04G2969 Fragaria x ananassa HOM05D004775 ORTHO05D005351 3.0e-68 262.3 196 62.2
Medtr5g066840 Medicago truncatula HOM05D004775 ORTHO05D005351 3.0e-68 262.3 197 59.4
Sopen12g030090 Solanum pennellii HOM05D004775 ORTHO05D005351 3.9e-68 261.9 196 63.3
Ca_05476_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 6.6e-68 261.2 198 61.1
Ca_30556_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 6.6e-68 261.2 198 61.1
TAR625G1011 Trochodendron aralioides HOM05D004775 ORTHO05D005351 1.1e-67 260.4 195 59.5
DCAR_020031 Daucus carota HOM05D004775 ORTHO05D005351 1.5e-67 260.0 196 62.2
TPR.G12363 Trifolium pratense HOM05D004775 ORTHO05D005351 1.9e-67 259.6 196 60.7
unitig_8.g4905 Utricularia gibba HOM05D004775 ORTHO05D005351 2.5e-67 259.2 185 62.7
Nn5g29801 Nelumbo nucifera HOM05D004775 ORTHO05D005351 5.6e-67 258.1 194 61.3
Sc26g0003070 Simmondsia chinensis HOM05D004775 ORTHO05D005351 5.6e-67 258.1 194 59.3
BcaB03g13545 Brassica carinata HOM05D004775 ORTHO05D005351 7.3e-67 257.7 132 90.2
Sabra02G0086400 Salix brachista HOM05D004775 ORTHO05D005351 1.1e-65 253.8 268 48.9
PSO532G0015 Papaver somniferum HOM05D004775 ORTHO05D005351 3.1e-65 252.3 188 61.7
PSO541G5225 Papaver somniferum HOM05D004775 ORTHO05D005351 3.1e-65 252.3 188 61.2
PSO541G4289 Papaver somniferum HOM05D004775 ORTHO05D005351 2.6e-64 249.2 188 61.2
unitig_578.g16108 Utricularia gibba HOM05D004775 ORTHO05D005351 1.3e-63 246.9 183 65.6
ECA246G4228 Erigeron canadensis HOM05D004775 ORTHO05D005351 2.2e-63 246.1 184 63.0
CAN.G1104.12 Capsicum annuum HOM05D004775 ORTHO05D005351 5.4e-62 241.5 194 57.7
HanXRQChr02g0046001 Helianthus annuus HOM05D004775 ORTHO05D005351 1.2e-61 240.4 195 56.9
GSVIVG01009216001 Vitis vinifera HOM05D004775 ORTHO05D005351 1.3e-60 236.9 202 57.9
Lsat_1_v5_gn_6_107340 Lactuca sativa HOM05D004775 ORTHO05D005351 2.3e-60 236.1 180 62.8
Dinv44879 Davidia involucrata HOM05D000583 ORTHO05D000442 1.5e-59 233.4 189 58.7
ECA247G3351 Erigeron canadensis HOM05D004775 ORTHO05D005351 3.3e-59 232.3 186 59.1
Actinidia19256 Actinidia chinensis HOM05D004775 ORTHO05D005351 1.6e-58 229.9 147 68.7
Phvul.009G145000 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 2.1e-58 229.6 196 57.1
Zm00001eb017320 Zea mays HOM05D004775 ORTHO05D005351 2.8e-58 229.2 187 56.7
GSVIVG01009218001 Vitis vinifera HOM05D004775 ORTHO05D005351 1.1e-57 227.3 210 54.8
ATR0800G163 Amborella trichopoda HOM05D004775 ORTHO05D005351 1.2e-56 223.8 132 72.7
vmacro21362 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 5.8e-56 221.5 269 45.7
ClCG11G014720 Citrullus lanatus HOM05D004775 ORTHO05D005351 1.3e-55 220.3 158 67.1
Glyma.06G092700 Glycine max HOM05D004775 ORTHO05D005351 2.9e-55 219.2 196 55.1
Phvul.008G183600 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 4.9e-55 218.4 153 65.4
CDE02G4408 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 4.2e-54 215.3 185 55.7
CDE01G0193 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 4.6e-53 211.8 194 54.1
PGSC0003DMG402002053 Solanum tuberosum HOM05D004775 ORTHO05D005351 4.6e-53 211.8 196 53.1
Nitab4.5_0000354g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 3.9e-52 208.8 171 60.2
Solyc12g088060.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 3.9e-52 208.8 131 66.4
Zm00001eb110680 Zea mays HOM05D004775 ORTHO05D005351 3.9e-52 208.8 198 50.5
Zm00001eb394470 Zea mays HOM05D004775 ORTHO05D005351 5.1e-52 208.4 186 53.2
EL10Ac1g00475 Beta vulgaris HOM05D004775 ORTHO05D005351 2.1e-50 203.0 190 51.6
Lsat_1_v5_gn_1_840 Lactuca sativa HOM05D004775 ORTHO05D005351 2.1e-50 203.0 214 49.1
Nitab4.5_0000885g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 2.1e-50 203.0 181 56.4
BcaC07g41856 Brassica carinata HOM05D004775 ORTHO05D005351 8.1e-50 201.1 195 55.9
BolC8t52458H Brassica oleracea HOM05D000348 ORTHO05D000244 8.1e-50 201.1 195 55.9
Eucgr.F00443 Eucalyptus grandis HOM05D004775 ORTHO05D005351 8.1e-50 201.1 197 51.3
BraA09t41874Z Brassica rapa HOM05D000348 ORTHO05D000244 1.8e-49 199.9 195 54.9
Os03g0356652 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 1.8e-49 199.9 196 50.5
SEGI_14572 Sequoiadendron giganteum HOM05D004775 ORTHO05D005351 3.1e-49 199.1 192 47.4
MBI16_g12296_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 1.2e-45 187.2 154 59.1
VMungo1309G0719 Vigna mungo HOM05D004775 ORTHO05D005351 1.2e-45 187.2 180 52.2
HanXRQChr05g0163501 Helianthus annuus HOM05D004775 ORTHO05D005351 4.6e-45 185.3 158 57.6
HanXRQChr10g0277731 Helianthus annuus HOM05D004775 ORTHO05D005351 6.0e-45 184.9 153 58.2
unitig_37.g13069 Utricularia gibba HOM05D000316 ORTHO05D005351 1.3e-44 183.7 181 48.1
Os07g0657500 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 2.3e-44 183.0 182 46.2
VMungo0647G0779 Vigna mungo HOM05D004775 ORTHO05D005351 1.5e-43 180.3 129 65.1
Hund17253 Selenicereus undatus HOM05D004775 ORTHO05D005351 1.9e-43 179.9 168 50.6
Mapoly0004s0283 Marchantia polymorpha HOM05D004775 ORTHO05D005351 2.8e-42 176.0 203 43.8
FvH4_5g34100 Fragaria vesca HOM05D004775 ORTHO05D005351 1.8e-41 173.3 136 61.8
Nn1g05655 Nelumbo nucifera HOM05D004775 ORTHO05D005351 2.4e-41 172.9 108 63.9
Hma1.2p1_0010F.1_g006440 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 4.0e-41 172.2 136 61.8
AUR62014379 Chenopodium quinoa HOM05D004775 ORTHO05D005351 9.0e-41 171.0 197 47.7
AUR62019121 Chenopodium quinoa HOM05D004775 ORTHO05D005351 2.0e-40 169.9 197 46.7
Haze_22493 Corylus avellana HOM05D004775 ORTHO05D005351 2.0e-40 169.9 184 50.5
Manes.12G122400 Manihot esculenta HOM05D004775 ORTHO05D005351 1.8e-36 156.8 188 42.0
Sopen12g030080 Solanum pennellii HOM05D000583 ORTHO05D000442 1.9e-35 153.3 140 52.1
SGA_v2.0_scaffold74G24544 Striga asiatica HOM05D004775 ORTHO05D005351 5.7e-27 125.2 186 37.6
MBI05_g43456_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 1.0e-23 114.4 87 56.3
MBI10_g33158_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 7.2e-22 108.2 86 55.8
MELO3C018834.2 Cucumis melo HOM05D006348 ORTHO05D008261 4.5e-16 89.0 161 31.1
vmacro22764 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 7.7e-16 88.2 72 55.6
ClCG02G002100 Citrullus lanatus HOM05D006348 ORTHO05D008261 1.9e-14 83.6 155 30.3
EL10Ac5g11991 Beta vulgaris HOM05D006348 ORTHO05D008261 1.2e-13 80.9 163 29.4
Lalb_Chr17g0347351 Lupinus albus HOM05D006348 ORTHO05D008261 2.7e-13 79.7 151 29.8
Dinv08741 Davidia involucrata HOM05D006348 ORTHO05D008261 5.2e-12 75.5 154 30.5
Dinv36973 Davidia involucrata HOM05D004775 ORTHO05D005351 5.2e-12 75.5 150 35.3
SGA_v2.0_scaffold159G37573 Striga asiatica HOM05D006348 ORTHO05D008261 5.2e-12 75.5 154 29.9
CDE09G1141 Ceratophyllum demersum HOM05D006348 ORTHO05D008261 6.7e-12 75.1 154 29.2
Nn1g03434 Nelumbo nucifera HOM05D006348 ORTHO05D008261 2.6e-11 73.2 154 29.2
CDE07G0871 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 5.7e-11 72.0 63 46.0
Pp3c3_2100 Physcomitrium patens HOM05D006348 ORTHO05D008261 2.6e-08 63.2 152 27.0
Medtr3g099560 Medicago truncatula HOM05D004775 ORTHO05D005351 1.0e-07 61.2 39 64.1
Zm00001eb329620 Zea mays HOM05D004775 ORTHO05D005351 6.5e-07 58.5 92 34.8


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