Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 6.1e-31 136.7 64 100.0
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 6.1e-31 136.7 64 100.0
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 6.1e-31 136.7 64 100.0
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.4e-30 135.6 64 98.4
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 4.4e-29 130.6 64 95.3
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 2.8e-28 127.9 64 92.2
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 2.8e-28 127.9 64 92.2
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.8e-27 125.2 64 90.6
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.8e-27 125.2 64 90.6
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.8e-27 125.2 64 90.6
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 4.3e-24 114.0 64 79.7
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 7.3e-24 113.2 64 79.7
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.6e-23 112.1 64 78.1
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.8e-23 111.3 64 76.6
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 3.6e-23 110.9 64 78.1
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.4e-22 109.0 64 75.0
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 1.4e-22 109.0 64 76.6
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 1.8e-22 108.6 62 79.0
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 76.6
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 3.0e-22 107.8 64 75.0
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 4.0e-22 107.5 62 77.4
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 5.2e-22 107.1 63 74.6
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 6.8e-22 106.7 63 74.6
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 8.9e-22 106.3 63 74.6
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 73.4
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 73.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 74.6
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 75.0
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 74.6
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 73.0
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 73.0
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.4e-21 104.0 63 73.0
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 4.4e-21 104.0 63 73.0
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 4.4e-21 104.0 64 75.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 9.8e-21 102.8 62 72.6
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 9.8e-21 102.8 63 76.2
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 9.8e-21 102.8 62 75.8
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 9.8e-21 102.8 59 76.3
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.3e-20 102.4 64 71.9
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 2.2e-20 101.7 72 68.1
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 3.7e-20 100.9 64 70.3
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 3.7e-20 100.9 63 69.8
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 3.7e-20 100.9 64 79.7
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 6.4e-20 100.1 59 72.9
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 1.4e-19 99.0 64 70.3
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 3.2e-19 97.8 74 64.9
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 5.4e-19 97.1 60 71.7
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 7.0e-19 96.7 60 71.7
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 2.0e-18 95.1 58 72.4
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 7.8e-18 93.2 64 67.2
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.0e-17 92.8 62 71.0
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.7e-17 92.0 60 71.7
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.5e-16 89.0 58 69.0
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.5e-16 88.2 62 67.7
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 7.3e-16 86.7 58 67.2
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 2.8e-15 84.7 58 62.1
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 3.6e-15 84.3 59 61.0
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.3e-14 81.6 64 64.1
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.3e-14 81.6 64 64.1
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 5.2e-14 80.5 64 64.1
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 8.9e-14 79.7 64 62.5
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.2e-13 79.3 64 62.5
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 7.5e-13 76.6 64 59.4
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 3.7e-12 74.3 58 60.3
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 6.4e-12 73.6 59 45.8
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.4e-11 71.6 53 56.6
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 9.2e-11 69.7 37 81.1
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.0e-09 66.2 45 62.2
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 1.0e-09 66.2 61 45.9
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 3.9e-09 64.3 41 75.6
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 1.9e-08 62.0 37 70.3
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 4.3e-08 60.8 29 93.1
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 4.3e-08 60.8 29 93.1
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 9.5e-08 59.7 29 89.7
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.8e-07 58.2 29 82.8
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 5.2e-06 53.9 36 63.9
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 8.9e-06 53.1 35 60.0


User provided reference genes

Program Settings