Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR005940 Cardamine hirsuta HOM05D000621 ORTHO05D000421 9.0e-48 193.4 105 100.0
CARHR002600 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.0e-31 139.0 104 77.9
AL4G46780 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 4.4e-26 121.3 104 63.5
AT2G47230 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 8.2e-25 117.1 104 63.5
AL1G39190 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.4e-24 116.3 104 63.5
AT1G03300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.6e-23 112.8 104 62.5
Carub.0001s2450 Capsella rubella HOM05D000621 ORTHO05D000421 2.0e-23 112.5 104 63.5
Carub.0004s2996 Capsella rubella HOM05D000621 ORTHO05D000421 2.0e-23 112.5 104 58.7
CARHR142610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 1.7e-22 109.4 104 56.7
Sp3g05300 Schrenkiella parvula HOM05D000621 ORTHO05D000421 8.0e-20 100.5 104 58.7
AT1G26540 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.8e-19 99.4 83 65.1
AL1G12810 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 2.4e-16 89.0 104 50.0
Thhalv10020194m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 3.1e-16 88.6 104 51.0
Carub.0001s0241 Capsella rubella HOM05D000621 ORTHO05D000421 1.2e-15 86.7 68 70.6
CARHR025430 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.7e-15 85.5 104 50.0
BcaB04g21331 Brassica carinata HOM05D000621 ORTHO05D000421 1.3e-14 83.2 104 47.1
BcaB04g21333 Brassica carinata HOM05D000621 ORTHO05D000421 1.3e-14 83.2 104 47.1
BcaB02g08793 Brassica carinata HOM05D000621 ORTHO05D000421 3.2e-13 78.6 104 44.2
BcaC05g30032 Brassica carinata HOM05D000621 ORTHO05D000421 1.6e-12 76.3 104 47.1
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 8.0e-12 73.9 85 52.9
BNapus_Darmor_BZH_scaffold_118p00180 Brassica napus HOM05D000621 ORTHO05D000421 8.0e-12 73.9 104 45.2
BraA01t04442Z Brassica rapa HOM05D000621 ORTHO05D000421 8.0e-12 73.9 104 45.2
BraA05t19059Z Brassica rapa HOM05D000621 ORTHO05D000421 8.0e-12 73.9 85 52.9
BcaC09g47889 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-11 73.6 104 44.2
BcaC09g47890 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-11 73.6 104 44.2
BolC1t05627H Brassica oleracea HOM05D000621 ORTHO05D000421 1.0e-11 73.6 104 45.2
BolC4t21700H Brassica oleracea HOM05D000621 ORTHO05D000421 1.8e-11 72.8 86 46.5
A05p41650 Brassica napus HOM05D000621 ORTHO05D000421 3.0e-11 72.0 111 45.0
BraA05t22885Z Brassica rapa HOM05D000621 ORTHO05D000421 3.0e-11 72.0 111 45.0
BcaC05g29812 Brassica carinata HOM05D000621 ORTHO05D000421 1.2e-10 70.1 99 48.5
Thhalv10001344m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 1.5e-10 69.7 91 46.2
BNapus_Darmor_BZH_scaffold_118p00170 Brassica napus HOM05D000621 ORTHO05D000421 2.6e-10 68.9 104 40.4
C05p60860 Brassica napus HOM05D000621 ORTHO05D000421 2.6e-10 68.9 99 47.5
BolC5t34743H Brassica oleracea HOM05D000621 ORTHO05D000421 2.6e-10 68.9 99 47.5
BcaC09g47891 Brassica carinata HOM05D000621 ORTHO05D000421 4.4e-10 68.2 104 40.4
BolC1t05625H Brassica oleracea HOM05D000621 ORTHO05D000421 4.4e-10 68.2 104 40.4
AT5G23770 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.3e-09 66.6 99 40.4
Aa31LG1G28530 Aethionema arabicum HOM05D000621 ORTHO05D000421 1.7e-09 66.2 84 41.7
BcaC05g30034 Brassica carinata HOM05D000621 ORTHO05D000421 2.2e-09 65.9 91 46.2
Aa31LG10G16240 Aethionema arabicum HOM05D000621 ORTHO05D000421 7.0e-08 60.8 98 33.7
BcaB04g18122 Brassica carinata HOM05D000621 ORTHO05D000421 9.2e-08 60.5 100 38.0
BcaB05g23879 Brassica carinata HOM05D000621 ORTHO05D000421 2.0e-07 59.3 99 37.4
Carub.0006s2152 Capsella rubella HOM05D000621 ORTHO05D000421 2.0e-07 59.3 103 36.9
CARHR189760 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.0e-07 59.3 97 38.1
A02p26480 Brassica napus HOM05D000621 ORTHO05D000421 3.5e-07 58.5 99 37.4
BraA02t07651Z Brassica rapa HOM05D000621 ORTHO05D000421 3.5e-07 58.5 99 37.4
AL5G45060 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 4.5e-07 58.2 99 33.3
AL6G35050 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 5.9e-07 57.8 99 35.4
Sp6g06690 Schrenkiella parvula HOM05D000621 ORTHO05D000421 5.9e-07 57.8 103 41.7
AL1G22510 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 7.7e-07 57.4 94 37.2
BcaB05g23880 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-06 57.0 99 37.4
Carub.0006s2153 Capsella rubella HOM05D000621 ORTHO05D000421 1.3e-06 56.6 99 35.4
AT3G62300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 1.7e-06 56.2 89 34.8
BraA09t40842Z Brassica rapa HOM05D000621 ORTHO05D000421 1.7e-06 56.2 102 32.4
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 1.7e-06 56.2 98 36.7
AT1G11420 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 2.3e-06 55.8 72 43.1
AT5G23780 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 2.3e-06 55.8 92 39.1
BcaB02g07341 Brassica carinata HOM05D000621 ORTHO05D000421 3.8e-06 55.1 103 30.1
BcaC09g47887 Brassica carinata HOM05D000621 ORTHO05D000421 3.8e-06 55.1 94 38.3
Thhalv10005813m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 6.6e-06 54.3 102 32.4


User provided reference genes

Program Settings