Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR005180 Cardamine hirsuta HOM05D000279 ORTHO05D116177 1.3e-61 239.6 120 100.0
BraA06t27147Z Brassica rapa HOM05D000279 ORTHO05D000498 1.2e-16 90.1 94 55.3
C02p12630 Brassica napus HOM05D000279 ORTHO05D000498 2.3e-15 85.9 97 55.7
C04p32290 Brassica napus HOM05D000279 ORTHO05D000498 2.3e-15 85.9 97 55.7
A09p68620 Brassica napus HOM05D000279 ORTHO05D000498 5.2e-15 84.7 97 54.6
BraA09t42204Z Brassica rapa HOM05D000279 ORTHO05D000498 5.2e-15 84.7 97 54.6
C09p62080 Brassica napus HOM05D000279 ORTHO05D000498 4.1e-12 75.1 100 45.0
BcaB01g03449 Brassica carinata HOM05D000279 ORTHO05D000498 3.5e-11 72.0 90 42.2
BcaC01g05284 Brassica carinata HOM05D000279 ORTHO05D000498 3.5e-11 72.0 90 42.2
BolC8t52792H Brassica oleracea HOM05D000279 ORTHO05D000498 3.5e-11 72.0 89 44.9
BolC9t59049H Brassica oleracea HOM05D000279 ORTHO05D000498 4.5e-11 71.6 100 43.0
A09p68220 Brassica napus HOM05D000279 ORTHO05D000498 5.9e-11 71.2 89 46.1
BraA09t42157Z Brassica rapa HOM05D000279 ORTHO05D000498 5.9e-11 71.2 89 46.1
Carub.0001s0437 Capsella rubella HOM05D000279 ORTHO05D000498 5.9e-11 71.2 89 42.7
C08p52660 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-10 70.5 95 43.2
CARHR002800 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.0e-10 70.5 101 42.6
C05p02070 Brassica napus HOM05D000279 ORTHO05D000498 1.3e-10 70.1 88 48.9
BraA10t44440Z Brassica rapa HOM05D000279 ORTHO05D000498 1.7e-10 69.7 100 43.0
Thhalv10008254m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.7e-10 69.7 103 39.8
BcaNung05220 Brassica carinata HOM05D000279 ORTHO05D000498 2.3e-10 69.3 112 34.8
BolC4t28472H Brassica oleracea HOM05D000279 ORTHO05D000498 2.3e-10 69.3 87 42.5
A10p02190 Brassica napus HOM05D000279 ORTHO05D000498 2.9e-10 68.9 87 46.0
A10p23780 Brassica napus HOM05D000279 ORTHO05D000498 2.9e-10 68.9 100 43.0
BraA10t42487Z Brassica rapa HOM05D000279 ORTHO05D000498 2.9e-10 68.9 87 46.0
C04p69730 Brassica napus HOM05D000279 ORTHO05D000498 3.8e-10 68.6 99 37.4
BcaC07g42310 Brassica carinata HOM05D000037 ORTHO05D001684 1.5e-09 66.6 65 56.9
BcaC04g19022 Brassica carinata HOM05D000279 ORTHO05D000498 1.9e-09 66.2 100 42.0
C09p62590 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-09 66.2 100 42.0
BolC9t59096H Brassica oleracea HOM05D000279 ORTHO05D000498 1.9e-09 66.2 100 42.0
BraA03t11582Z Brassica rapa HOM05D000637 ORTHO05D002686 1.9e-09 66.2 90 38.9
BcaC02g07236 Brassica carinata HOM05D000637 ORTHO05D002686 7.2e-09 64.3 99 36.4
BcaB06g29248 Brassica carinata HOM05D000279 ORTHO05D000498 9.5e-09 63.9 110 33.6
Thhalv10017071m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.6e-08 63.2 109 32.1
A04p32240 Brassica napus HOM05D000279 ORTHO05D000498 2.1e-08 62.8 99 35.4
Thhalv10026867m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 8.9e-07 57.4 102 32.4
Thhalv10023897m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.0e-06 56.2 92 39.1
CARHR137530 Cardamine hirsuta HOM05D000279 ORTHO05D000498 7.5e-06 54.3 84 34.5


User provided reference genes

Program Settings