Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 3.5e-255 884.4 430 100.0
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 8.1e-236 820.1 452 88.1
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 2.2e-233 812.0 452 88.5
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 2.3e-230 802.0 452 86.9
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.5e-229 799.3 452 87.6
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 6.2e-228 793.9 452 85.4
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.1e-224 783.1 454 86.1
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.1e-224 783.1 454 86.1
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 6.0e-223 777.3 453 85.9
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 2.3e-222 775.4 455 85.7
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.2e-207 726.5 453 79.0
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 7.4e-189 664.1 399 83.7
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 2.5e-184 649.0 458 69.2
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 2.5e-184 649.0 419 75.2
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 1.2e-183 646.7 453 70.4
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.7e-183 645.6 462 68.6
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.7e-183 645.6 454 70.7
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 5.1e-182 641.3 451 71.2
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 2.6e-181 639.0 450 70.4
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 4.4e-181 638.3 448 69.9
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 2.2e-180 636.0 454 69.2
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 2.8e-180 635.6 424 72.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 3.7e-180 635.2 432 70.1
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 4.8e-180 634.8 420 73.8
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 4.8e-180 634.8 435 69.9
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.8e-179 632.9 422 71.6
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 4.1e-179 631.7 452 69.0
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 5.3e-179 631.3 449 69.5
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.5e-178 629.8 430 70.9
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.5e-178 629.8 430 70.9
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.6e-178 629.0 422 71.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.5e-178 628.6 455 68.6
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 7.7e-178 627.5 456 68.2
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.7e-177 626.3 421 72.2
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 2.9e-177 625.5 427 70.3
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.9e-177 625.5 428 68.9
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 5.5e-176 621.3 424 71.0
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.6e-175 619.8 417 71.5
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.6e-175 619.8 427 69.6
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.6e-175 619.8 481 65.5
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.1e-175 619.4 419 71.1
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 8.0e-175 617.5 451 67.8
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.0e-174 617.1 419 71.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 6.7e-174 614.4 420 70.7
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.5e-173 613.2 442 68.6
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 2.0e-173 612.8 416 71.6
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.0e-173 612.8 419 72.6
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 2.0e-173 612.8 452 66.2
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 4.4e-173 611.7 458 65.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.7e-173 611.3 461 65.7
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 9.7e-173 610.5 420 70.0
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.3e-172 610.1 409 72.6
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.8e-171 606.3 454 68.1
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 5.3e-171 604.7 421 70.3
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 7.0e-171 604.4 453 65.8
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.2e-170 603.6 470 65.1
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 2.0e-170 602.8 421 70.3
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 2.6e-170 602.4 420 70.0
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 1.9e-168 596.3 472 64.2
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 1.5e-165 586.6 420 67.9
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 3.7e-156 555.4 368 73.1
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.4e-155 553.5 362 74.6
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.6e-154 550.1 422 65.2
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 4.5e-154 548.5 422 62.6
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 4.5e-154 548.5 598 51.7
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.0e-153 547.4 418 64.8
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.8e-153 545.4 448 62.5
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.9e-152 543.1 358 74.0
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.2e-151 540.4 389 69.4
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 1.2e-151 540.4 547 55.0
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 3.6e-151 538.9 406 66.5
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 7.5e-149 531.2 380 68.2
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 6.3e-148 528.1 406 61.3
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 4.5e-146 521.9 378 68.0
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.5e-146 521.9 454 61.2
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 5.2e-142 508.4 319 75.2
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 2.0e-141 506.5 422 61.1
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 7.8e-138 494.6 411 63.0
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.3e-132 477.2 345 68.7
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 2.2e-132 476.5 347 66.6
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.3e-129 466.5 358 64.2
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.1e-127 459.9 388 60.1
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.6e-125 453.0 355 63.9
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.2e-123 446.0 285 75.8
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 6.2e-119 431.8 340 64.1
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.9e-107 393.7 370 55.4
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 2.7e-106 389.8 315 61.9
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.3e-102 375.6 234 76.5
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.0e-101 373.6 401 48.6
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 9.9e-101 371.3 408 47.5
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 1.1e-99 367.9 404 48.5
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 4.6e-98 362.5 404 46.0
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 4.2e-83 312.8 200 75.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.7e-82 310.1 230 64.8
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 5.3e-70 269.2 214 61.2
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.9e-61 239.2 184 65.8
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.1e-58 230.7 427 36.1
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.3e-57 227.3 127 83.5
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 4.1e-54 216.5 395 36.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 7.7e-45 185.7 139 64.0
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 9.4e-43 178.7 226 47.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.9e-36 157.1 89 84.3
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 5.0e-36 156.4 413 28.6
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 5.5e-35 152.9 432 30.6
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 6.1e-34 149.4 89 73.0
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-29 135.2 179 40.2
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 1.6e-26 124.8 122 51.6
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.4e-24 117.1 72 70.8
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.0e-21 107.8 84 65.5
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 4.6e-21 106.7 144 43.1
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.3e-15 88.6 45 91.1
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 1.4e-14 85.1 114 41.2
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 3.2e-14 84.0 72 54.2
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.6e-08 64.3 59 47.5
BcaB02g06893 Brassica carinata HOM05D000595 ORTHO05D008454 2.2e-07 61.2 54 66.7
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 3.7e-07 60.5 37 78.4
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 3.7e-07 60.5 37 78.4
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.1e-06 58.9 53 49.1
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.4e-06 58.5 35 80.0


User provided reference genes

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