Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 7.4e-225 783.5 378 100.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.5e-201 706.1 382 89.0
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.3e-197 693.0 382 88.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.2e-196 688.3 384 87.2
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 6.7e-194 680.6 382 87.4
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.5e-190 668.3 378 85.7
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 6.5e-189 664.1 351 90.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.0e-186 656.8 389 83.8
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.0e-186 656.8 389 83.8
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 4.0e-186 654.8 389 83.5
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 9.7e-185 650.2 383 83.8
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.1e-183 646.7 388 82.7
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 3.1e-183 645.2 388 82.5
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 4.7e-171 604.7 380 78.7
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 4.6e-150 535.0 385 69.4
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 6.6e-141 504.6 372 65.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 1.5e-140 503.4 378 64.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.6e-140 501.5 381 64.3
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 7.3e-140 501.1 348 69.0
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.6e-139 500.0 381 64.6
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 4.7e-139 498.4 381 64.3
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 3.1e-138 495.7 335 69.0
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.4e-137 491.9 373 64.6
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 7.6e-137 491.1 390 63.1
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.9e-135 486.5 326 70.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.2e-134 483.8 392 63.0
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 6.0e-134 481.5 379 63.3
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 2.3e-133 479.6 385 63.1
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 5.1e-133 478.4 357 66.7
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.1e-133 478.4 380 62.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 5.1e-133 478.4 356 66.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.1e-132 477.2 345 65.5
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.6e-132 474.9 373 63.5
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 5.6e-132 474.9 374 63.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 9.6e-132 474.2 376 62.8
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 9.6e-132 474.2 328 69.8
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.1e-131 473.0 334 68.6
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 4.7e-131 471.9 361 64.5
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 5.2e-130 468.4 329 68.1
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.2e-130 468.4 374 62.6
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 6.9e-130 468.0 406 59.1
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.5e-129 466.8 339 67.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 3.4e-129 465.7 335 67.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 5.8e-129 464.9 330 67.9
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.3e-128 463.8 361 63.7
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 2.2e-128 463.0 379 62.8
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 3.8e-128 462.2 376 62.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 1.4e-127 460.3 354 64.4
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.2e-127 459.1 366 62.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 4.2e-127 458.8 391 59.6
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 5.4e-127 458.4 365 60.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.2e-126 457.2 362 63.0
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 7.8e-126 454.5 340 64.1
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.0e-125 454.1 327 66.7
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.3e-125 453.0 334 66.2
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 6.6e-125 451.4 333 64.9
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 3.3e-124 449.1 371 60.6
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 5.6e-124 448.4 336 62.5
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 2.1e-123 446.4 424 54.5
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 8.1e-123 444.5 327 64.8
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.8e-122 443.4 380 58.7
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 6.9e-122 441.4 333 63.7
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.0e-121 439.9 351 61.0
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 2.4e-119 433.0 335 63.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 4.2e-119 432.2 330 61.8
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.2e-118 430.6 331 61.9
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.2e-118 430.6 400 54.8
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.1e-118 429.9 353 59.2
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.7e-118 429.5 354 58.2
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.3e-117 426.4 329 62.3
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.3e-117 426.4 359 57.9
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.1e-117 425.2 329 62.3
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.9e-112 409.5 331 58.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.1e-111 407.5 332 58.4
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.4e-111 407.1 329 58.7
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.2e-110 404.1 349 58.2
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 3.3e-108 396.0 361 54.0
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.4e-106 390.6 377 54.4
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.5e-105 387.1 359 56.5
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.3e-104 384.0 359 56.0
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.9e-104 382.1 305 61.0
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.4e-103 380.6 312 61.5
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 3.2e-103 379.4 537 42.6
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 5.1e-101 372.1 333 58.0
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.5e-100 369.8 362 55.8
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.5e-100 369.8 314 58.3
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 9.6e-100 367.9 348 56.6
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 4.5e-97 359.0 242 68.6
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 3.6e-94 349.4 305 57.0
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.3e-92 342.8 320 55.3
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 6.9e-90 335.1 284 56.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.0e-88 331.3 257 61.1
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.6e-86 323.9 312 51.6
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 3.6e-86 322.8 255 61.6
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.7e-80 303.9 324 45.1
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.2e-79 299.3 401 42.9
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.8e-77 293.9 240 56.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.0e-77 293.1 347 47.0
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.0e-69 268.1 168 68.5
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.4e-69 267.7 165 71.5
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 4.4e-68 262.7 326 42.6
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.2e-59 233.8 347 39.5
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 4.0e-37 159.8 102 76.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.4e-36 156.4 140 53.6
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 8.3e-27 125.6 98 62.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.2e-26 123.6 78 71.8
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.1e-18 95.9 75 64.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 5.1e-16 89.7 97 46.4
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.1e-10 72.0 59 61.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.4e-10 69.7 58 55.2
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.6e-09 66.6 39 71.8
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.1e-07 62.0 91 39.6
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 9.6e-07 58.9 83 39.8


User provided reference genes

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