Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR000110 Cardamine hirsuta HOM05D000595 ORTHO05D004141 2.9e-69 265.0 123 100.0
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 2.3e-58 228.8 112 90.2
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 5.1e-58 227.6 112 91.1
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 5.1e-58 227.6 112 90.2
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 1.9e-57 225.7 112 90.2
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.9e-57 225.7 112 90.2
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 1.9e-57 225.7 114 90.4
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 3.3e-57 224.9 112 89.3
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 9.6e-57 223.4 112 90.2
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 2.4e-55 218.8 111 89.2
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 9.0e-55 216.9 112 85.7
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 3.8e-53 211.5 112 83.9
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 1.1e-52 209.9 112 84.8
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 1.9e-52 209.1 112 83.9
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 3.2e-52 208.4 112 83.9
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 1.2e-51 206.5 113 83.2
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 3.5e-51 204.9 112 80.4
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 8.7e-50 200.3 110 82.7
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 3.1e-47 191.8 109 75.2
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 5.3e-47 191.0 111 73.9
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 9.0e-47 190.3 109 77.1
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 1.5e-46 189.5 109 77.1
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 1.5e-46 189.5 114 75.4
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.5e-46 189.5 114 72.8
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 1.5e-46 189.5 109 78.0
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 2.0e-46 189.1 109 76.1
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 2.6e-46 188.7 109 77.1
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 4.5e-46 188.0 109 75.2
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 1.3e-45 186.4 109 72.5
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 1.3e-45 186.4 114 72.8
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 1.3e-45 186.4 109 75.2
Haze_07993 Corylus avellana HOM05D000595 ORTHO05D004141 1.7e-45 186.0 109 75.2
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 1.7e-45 186.0 109 74.3
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 1.7e-45 186.0 114 71.1
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 2.2e-45 185.7 109 74.3
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.9e-45 185.3 109 75.2
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 3.8e-45 184.9 109 73.4
Cpa.g.sc71.50 Carica papaya HOM05D000595 ORTHO05D004141 4.9e-45 184.5 108 75.0
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 6.4e-45 184.1 109 72.5
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 8.4e-45 183.7 109 71.6
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 8.4e-45 183.7 114 70.2
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.1e-44 183.3 109 72.5
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 1.1e-44 183.3 109 73.4
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 1.1e-44 183.3 108 75.9
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 1.1e-44 183.3 109 72.5
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.1e-44 183.3 109 75.2
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 1.4e-44 183.0 109 71.6
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 1.4e-44 183.0 114 71.1
RcHm_v2.0_Chr7g0213921 Rosa chinensis HOM05D000595 ORTHO05D004141 1.4e-44 183.0 109 72.5
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 2.4e-44 182.2 109 72.5
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 2.4e-44 182.2 109 72.5
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 2.4e-44 182.2 114 71.9
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 3.2e-44 181.8 114 70.2
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.2e-44 181.8 109 72.5
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 5.4e-44 181.0 109 74.3
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 7.1e-44 180.6 114 70.2
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 7.1e-44 180.6 114 70.2
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 9.3e-44 180.3 111 71.2
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 9.3e-44 180.3 109 73.4
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 1.2e-43 179.9 109 73.4
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.2e-43 179.9 109 72.5
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 1.6e-43 179.5 109 71.6
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 1.6e-43 179.5 109 72.5
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 1.6e-43 179.5 114 68.4
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 2.1e-43 179.1 114 69.3
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 2.1e-43 179.1 114 69.3
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 2.1e-43 179.1 114 69.3
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 2.1e-43 179.1 109 72.5
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 2.7e-43 178.7 109 70.6
vmacro00078 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 2.7e-43 178.7 114 69.3
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 4.6e-43 177.9 109 71.6
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 6.0e-43 177.6 109 70.6
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 6.0e-43 177.6 109 71.6
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 6.0e-43 177.6 114 69.3
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 6.0e-43 177.6 109 70.6
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 7.9e-43 177.2 109 71.6
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 1.3e-42 176.4 109 71.6
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 1.8e-42 176.0 109 70.6
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 1.8e-42 176.0 111 66.7
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 3.0e-42 175.3 112 73.2
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 3.0e-42 175.3 133 63.2
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 3.0e-42 175.3 109 71.6
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 3.9e-42 174.9 114 66.7
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 1.1e-41 173.3 109 68.8
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.5e-41 172.9 114 66.7
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 1.5e-41 172.9 109 68.8
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 1.5e-41 172.9 111 68.5
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.9e-41 172.6 109 67.9
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 1.9e-41 172.6 109 67.0
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 2.5e-41 172.2 109 68.8
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 3.3e-41 171.8 114 65.8
Cfa012656 Carpinus fangiana HOM05D000595 ORTHO05D004141 3.3e-41 171.8 108 72.2
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 3.3e-41 171.8 109 68.8
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 4.3e-41 171.4 109 69.7
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 5.6e-41 171.0 109 66.1
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 5.6e-41 171.0 118 66.1
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 9.6e-41 170.2 114 65.8
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 2.1e-40 169.1 109 65.1
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 2.1e-40 169.1 109 69.7
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 2.8e-40 168.7 109 66.1
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 3.7e-40 168.3 109 67.0
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 1.1e-39 166.8 106 70.8
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 5.3e-39 164.5 109 64.2
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 4.5e-38 161.4 114 61.4
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 5.8e-38 161.0 109 66.1
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 1.7e-37 159.5 109 63.3
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 6.4e-37 157.5 109 63.3
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 1.9e-36 156.0 109 62.4
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.9e-36 156.0 113 61.1
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 2.1e-35 152.5 109 62.4
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 3.5e-35 151.8 109 65.1
MBI04_g21144_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 2.3e-34 149.1 112 58.9
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 8.7e-34 147.1 109 59.6
HPP92_024265 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.1e-33 146.7 101 64.4
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 3.3e-33 145.2 112 58.0
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 7.4e-33 144.1 99 64.6
Thecc.05G000100 Theobroma cacao HOM05D000595 ORTHO05D004141 1.6e-32 142.9 98 68.4
FAN18G1127 Fragaria x ananassa HOM05D000595 ORTHO05D004141 2.8e-32 142.1 85 70.6
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.2e-28 128.6 111 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 7.1e-28 127.5 111 49.5
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 7.9e-27 124.0 113 52.2
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.0e-26 123.6 77 71.4
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.3e-26 123.2 111 48.6
Mapoly0059s0108 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.8e-26 122.9 116 46.6
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 8.7e-26 120.6 115 47.0
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 5.7e-25 117.9 109 45.9
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.6e-24 116.3 110 50.0
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.2e-24 115.9 111 46.8
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 8.2e-24 114.0 110 47.3
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 3.6e-11 72.0 43 72.1


User provided reference genes

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